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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
73
candidate regulatory elements
47
target gene predictions
39
chromatin state
18
accessible chromatin
6
binding sites
histone modifications
2
gene expression
Date released
107
September, 2022
50
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
147
bed bed3+
36
bed bed9
11
bigWig
2
tsv
Organism
185
Homo sapiens
Biosample type
148
tissue
31
cell line
6
primary cell
Organ
931
epithelium
645
kidney
437
connective tissue
400
brain
367
musculature of body
306
lung
278
intestine
267
pancreas
258
vasculature
248
heart
240
limb
204
embryo
195
blood vessel
193
bodily fluid
188
skin of body
183
blood
167
large intestine
143
liver
140
extraembryonic component
117
stomach
105
eye
85
adipose tissue
83
bone element
83
small intestine
82
mammary gland
80
uterus
72
adrenal gland
70
prostate gland
69
placenta
67
artery
64
ureter
59
penis
58
lymph node
48
thymus
46
gonad
42
esophagus
42
spinal cord
33
spleen
24
nerve
23
lymphatic vessel
23
lymphoid tissue
23
testis
22
ovary
22
thyroid gland
22
vein
18
mouth
18
skeleton
15
bronchus
12
breast
11
bone marrow
11
pituitary gland
10
tongue
10
urinary bladder
9
vagina
4
nose
3
trachea
1
pericardium
Project
179
AMP
6
ENCODE
Genome assembly (visualization)
183
hg19
52
GRCh38
annotation_type!
histone modifications
month_released!
January, 2022
BIOSAMPLE
TYPE
185 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
gene expression
tissue
large intestine
27
14
13
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
colonic mucosa
4
2
3
mucosa of rectum
4
2
3
+ See 17 more…
cell line
HT-29
2
2
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
HCT-116 cell
1
1
2
RKO
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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