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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
43
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
41
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
March, 2020
1
October, 2022
Available data
131
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
168
Homo sapiens
Biosample type
131
tissue
31
cell line
6
primary cell
Organ
925
epithelium
643
kidney
434
connective tissue
380
brain
359
musculature of body
306
lung
279
intestine
262
pancreas
249
vasculature
heart
233
limb
203
embryo
193
bodily fluid
191
skin of body
186
blood vessel
183
blood
168
large intestine
141
extraembryonic component
134
liver
117
stomach
105
eye
83
bone element
83
small intestine
82
mammary gland
81
uterus
80
adipose tissue
72
adrenal gland
71
prostate gland
70
placenta
64
artery
64
ureter
59
penis
58
lymph node
48
gonad
47
thymus
44
esophagus
40
spinal cord
33
spleen
25
testis
23
lymphatic vessel
23
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
21
vein
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
vagina
9
urinary bladder
4
nose
3
trachea
1
pericardium
Project
162
AMP
6
ENCODE
Genome assembly (visualization)
164
hg19
43
GRCh38
annotation_type!
histone modifications
month_released!
March, 2020
organ_slims!
heart
BIOSAMPLE
TYPE
168 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
eQTL
gene expression
tissue
large intestine
27
14
13
1
sigmoid colon
10
6
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
mucosa of rectum
4
2
3
+ See 7 more…
cell line
HT-29
2
2
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
HCT-116 cell
1
1
2
RKO
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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