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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
98
accessible chromatin
88
candidate regulatory elements
69
target gene predictions
54
chromatin state
54
gene expression
35
binding sites
histone modifications
26
eQTL
16
differential activity
12
Fine-mapped variants
7
variant allelic effects
4
caQTL
2
pQTL
Date released
137
September, 2022
93
February, 2021
50
November, 2021
22
June, 2020
22
September, 2023
18
February, 2024
May, 2021
15
March, 2020
May, 2020
14
January, 2020
13
February, 2020
12
October, 2022
11
August, 2021
9
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
4
February, 2023
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
November, 2019
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
May, 2019
Available data
312
bed bed3+
78
tsv
64
bigWig
47
bed bed9
7
txt
3
bigBed bed9
1
bigBed narrowPeak
Organism
465
Homo sapiens
Biosample type
277
primary cell
123
tissue
38
in vitro differentiated cells
26
cell line
1
stem cell
Organ
872
epithelium
627
kidney
409
connective tissue
388
brain
357
musculature of body
303
lung
275
intestine
240
vasculature
234
heart
232
pancreas
229
limb
197
embryo
189
bodily fluid
186
skin of body
184
blood vessel
179
blood
164
large intestine
138
extraembryonic component
136
liver
116
stomach
103
eye
83
small intestine
82
adipose tissue
82
bone element
80
mammary gland
79
uterus
71
adrenal gland
69
placenta
69
prostate gland
63
artery
61
ureter
58
penis
57
lymph node
48
gonad
46
thymus
45
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
nerve
22
ovary
22
thyroid gland
20
lymphatic vessel
19
mouth
19
vein
18
skeleton
15
bronchus
12
breast
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
2
pituitary gland
1
pericardium
Project
384
AMP
50
ENCODE
20
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
381
hg19
147
GRCh38
2
hg18
annotation_type!
histone modifications
month_released!
May, 2020
May, 2021
BIOSAMPLE
TYPE
465 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
eQTL
differential activity
Fine-mapped variants
variant allelic effects
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
fibroblast of lung
6
3
4
2
osteoblast
5
2
1
1
2
3
foreskin fibroblast
1
6
1
1
4
+ See 46 more…
tissue
adipose tissue
2
7
7
6
3
1
4
subcutaneous adipose tissue
2
2
1
5
6
1
3
coronary artery
3
3
2
3
1
2
3
1
omental fat pad
2
5
2
2
2
2
3
tibial artery
3
3
2
2
1
2
3
+ See 6 more…
in vitro differentiated cells
adipocyte
4
4
2
6
1
1
mesenchymal stem cell
1
3
2
2
1
chondrocyte
5
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
+ See 4 more…
cell line
GM23248
1
2
1
1
1
HT1080
2
1
1
fibroblast of cardiac tissue
2
1
foreskin fibroblast
1
1
1
smooth muscle cell of the coronary artery
1
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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