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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
37
candidate regulatory elements
10
accessible chromatin
6
binding sites
6
target gene predictions
histone modifications
3
chromatin state
2
eQTL
2
gene expression
Date released
September, 2022
41
February, 2021
7
June, 2020
6
November, 2021
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
62
bed bed3+
3
bigWig
2
tsv
Organism
66
Homo sapiens
Biosample type
43
tissue
17
cell line
6
primary cell
Organ
737
epithelium
421
kidney
299
connective tissue
227
brain
194
pancreas
181
vasculature
158
musculature of body
137
heart
136
blood vessel
116
embryo
114
bodily fluid
111
intestine
110
blood
101
limb
97
liver
93
lung
84
skin of body
78
eye
67
uterus
66
large intestine
61
adipose tissue
48
artery
47
stomach
41
bone element
39
extraembryonic component
38
mammary gland
33
lymph node
30
prostate gland
29
adrenal gland
28
penis
26
small intestine
25
ureter
24
esophagus
24
gonad
21
placenta
18
spinal cord
16
nerve
15
spleen
15
vein
14
lymphatic vessel
14
thymus
13
testis
10
ovary
10
thyroid gland
9
bronchus
9
skeleton
8
bone marrow
8
lymphoid tissue
7
mouth
6
breast
4
tongue
4
urinary bladder
4
vagina
3
trachea
2
pituitary gland
1
nose
1
pericardium
Project
60
AMP
6
ENCODE
Genome assembly (visualization)
62
hg19
10
GRCh38
annotation_type!
histone modifications
month_released!
May, 2021
September, 2022
BIOSAMPLE
TYPE
66 results
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Clear Filters
candidate regulatory elements
accessible chromatin
binding sites
target gene predictions
chromatin state
eQTL
gene expression
tissue
large intestine
15
1
sigmoid colon
5
1
1
transverse colon
4
1
1
colonic mucosa
2
1
mucosa of rectum
2
1
+ See 7 more…
cell line
HCT-116 cell
1
2
HCT116
1
2
HT-29
1
1
1
RKO
1
1
1
SW480
1
1
1
+ See 2 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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