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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1218target gene predictions
  • 939chromatin state
  • 887accessible chromatin
  • histone modifications
  • 817binding sites
  • 599gene expression
  • 186eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 4sQTL
  • 4variant to gene
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2505September, 2022
  • 1750February, 2021
  • 378February, 2024
  • 333November, 2021
  • 289June, 2020
  • 286September, 2023
  • May, 2021
  • 155May, 2020
  • 128March, 2020
  • 111August, 2021
  • 106January, 2022
  • 101October, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 4937bed bed3+
  • 3488tsv
  • 864bed bed9
  • 533bigWig
  • 108txt
  • 35bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9368Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1007ChIP-Atlas
  • 966ENCODE
  • 497DGA
  • 485AMP
  • 403T2DKP
  • 281KPMP
  • 208T1D
  • 1744DN
  • 151GTEx
  • 139 T2DKP
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 76BLUEPRINT
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
Biosample type
  • 5203tissue
  • 2165primary cell
  • 1705cell line
  • 337in vitro differentiated cells
  • 4stem cell
Organ
  • 2902vasculature
  • 2839blood vessel
  • 2830bodily fluid
  • 2820blood
  • 2656vein
  • 896epithelium
  • 646kidney
  • 439connective tissue
  • 408brain
  • 367musculature of body
  • 303lung
  • 275intestine
  • 247heart
  • 239limb
  • 238pancreas
  • 197embryo
  • 186skin of body
  • 164large intestine
  • 146liver
  • 138extraembryonic component
  • 116stomach
  • 105eye
  • 95adipose tissue
  • 83bone element
  • 83small intestine
  • 80mammary gland
  • 79uterus
  • 72artery
  • 71adrenal gland
  • 69placenta
  • 69prostate gland
  • 64ureter
  • 58penis
  • 57lymph node
  • 48gonad
  • 47thymus
  • 45esophagus
  • 42spinal cord
  • 33spleen
  • 25nerve
  • 25testis
  • 23lymphatic vessel
  • 23lymphoid tissue
  • 22ovary
  • 22thyroid gland
  • 19mouth
  • 18skeleton
  • 15bronchus
  • 12breast
  • 11bone marrow
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 4nose
  • 3trachea
  • 2pituitary gland
  • 1pericardium
Project
  • 8705AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5842hg19
  • 1791GRCh38
  • 4hg18
annotation_type!
  • histone modifications
month_released!
  • May, 2021
BIOSAMPLE
TYPE

9416 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
variant to gene
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart3720215132
stomach401919311
kidney291416101711
brain29161821121
primary cell
common myeloid progenitor, CD34-positive271313
B cell17986
endothelial cell371528122
macrophage331219311
CD4-positive, alpha-beta memory T cell1499
cell line
HeLa-S355431
A54921181812
H1-hESC1381128
K562722712
MCF-795513
in vitro differentiated cells
hematopoietic multipotent progenitor cell19101011
neural progenitor cell554107
adipocyte426411
cardiomyocytes11
extended pluripotent stem (EPS) cells9
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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