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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
44
candidate regulatory elements
26
target gene predictions
21
chromatin state
10
accessible chromatin
10
binding sites
histone modifications
4
eQTL
3
gene expression
1
variant allelic effects
Date released
63
September, 2022
33
February, 2021
9
June, 2020
4
January, 2022
3
March, 2024
3
May, 2021
2
November, 2021
1
February, 2024
1
March, 2020
October, 2022
Available data
91
bed bed3+
21
bed bed9
3
tsv
1
bigWig
Organism
119
Homo sapiens
Biosample type
54
cell line
51
tissue
14
primary cell
Organ
925
epithelium
644
kidney
431
connective tissue
412
brain
365
musculature of body
303
lung
280
intestine
271
pancreas
257
vasculature
251
heart
242
limb
203
embryo
196
blood vessel
187
skin of body
174
bodily fluid
168
large intestine
164
blood
143
liver
140
extraembryonic component
118
stomach
103
eye
88
adipose tissue
84
small intestine
82
bone element
80
uterus
79
mammary gland
73
adrenal gland
71
prostate gland
69
artery
69
placenta
64
ureter
57
penis
56
lymph node
48
gonad
48
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
24
testis
23
lymphatic vessel
23
lymphoid tissue
23
ovary
23
thyroid gland
21
vein
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
117
AMP
2
ENCODE
Genome assembly (visualization)
112
hg19
27
GRCh38
annotation_type!
histone modifications
month_released!
October, 2022
BIOSAMPLE
TYPE
119 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
eQTL
gene expression
variant allelic effects
cell line
22Rv1
4
2
2
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
RWPE1
2
1
1
1
1
LNCAP
2
1
1
1
+ See 7 more…
tissue
ovary
8
6
4
1
1
1
testis
7
3
3
1
1
1
1
prostate gland
4
2
2
1
2
1
prostate
1
primary cell
epithelial cell of prostate
4
3
2
luteal cell
1
1
Leydig cell
1
luminal epithelial cell of prostatic duct
1
somatic gonadal cell
1
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