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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • histone modifications
  • 907accessible chromatin
  • 877candidate regulatory elements
  • 817binding sites
  • 689gene expression
  • 523target gene predictions
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 111chromatin state
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • September, 2022
  • 1750February, 2021
  • 378February, 2024
  • 333November, 2021
  • 289June, 2020
  • 286September, 2023
  • 275May, 2021
  • 155May, 2020
  • 128March, 2020
  • 111August, 2021
  • 106January, 2022
  • 101October, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 3576tsv
  • 3436bed bed3+
  • 542bigWig
  • 108txt
  • 40bigBed bed9
  • 36bed bed9
  • 34bed bed9+
  • 26csv
  • 15bigBed narrowPeak
  • 1bam
Organism
  • 7138Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1007ChIP-Atlas
  • 966ENCODE
  • 645DGA
  • 510AMP
  • 403T2DKP
  • 307T1D
  • 281KPMP
  • 1744DN
  • 173 T2DKP
  • 151GTEx
  • 117BLUEPRINT
  • 108T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 1EpiMap
Biosample type
  • 3857tissue
  • 1821primary cell
  • 1231cell line
  • 271in vitro differentiated cells
  • 4stem cell
Organ
  • 2831vasculature
  • 2783blood vessel
  • 2759bodily fluid
  • 2755blood
  • 2651vein
  • 780epithelium
  • 421kidney
  • 335connective tissue
  • 239brain
  • 227pancreas
  • 169musculature of body
  • 143heart
  • 123embryo
  • 117intestine
  • 107liver
  • 104limb
  • 97lung
  • 89skin of body
  • 78eye
  • 74adipose tissue
  • 71large intestine
  • 69uterus
  • 54artery
  • 49stomach
  • 42extraembryonic component
  • 41bone element
  • 40mammary gland
  • 34lymph node
  • 32prostate gland
  • 31adrenal gland
  • 29penis
  • 27small intestine
  • 25gonad
  • 25ureter
  • 24esophagus
  • 22placenta
  • 19spinal cord
  • 17lymphatic vessel
  • 16nerve
  • 16spleen
  • 15thymus
  • 13testis
  • 12pituitary gland
  • 11ovary
  • 11thyroid gland
  • 9bronchus
  • 9skeleton
  • 8bone marrow
  • 8lymphoid tissue
  • 7breast
  • 7mouth
  • 4tongue
  • 4urinary bladder
  • 4vagina
  • 3trachea
  • 1nose
  • 1pericardium
Project
  • 6475AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 3521hg19
  • 970GRCh38
  • 4hg18
annotation_type!
  • histone modifications
month_released!
  • September, 2022
BIOSAMPLE
TYPE

7186 results

search-icontable-tab-icon
Clear Filters
pQTL
accessible chromatin
candidate regulatory elements
binding sites
gene expression
target gene predictions
eQTL
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
islet of Langerhans521111313222
kidney101517112
heart51813122
liver4612392211
primary cell
monocyte1811524121
endothelial cell153297122
macrophage123239311
fibroblast1631426
hepatocyte8111322
cell line
HeLa-S32152
H1-hESC12838
EndoC_BH1818131
K562112171
HFFc619
in vitro differentiated cells
neural progenitor cell10171
adipocyte421144
embryonic stem cell6115
hematopoietic multipotent progenitor cell1911
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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