Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 11accessible chromatin
  • 10candidate regulatory elements
  • 9gene expression
  • 8chromatin state
  • 8target gene predictions
  • 7Fine-mapped variants
  • 7eQTL
  • 6binding sites
  • histone modifications
  • 4variant allelic effects
  • 2caQTL
  • 2differential activity
Date released
  • 20September, 2022
  • 11February, 2021
  • 6March, 2020
  • 5May, 2020
  • 5September, 2023
  • 4February, 2020
  • 4January, 2020
  • 4March, 2025
  • 3February, 2023
  • 3January, 2022
  • 3June, 2020
  • 2May, 2021
  • 2November, 2019
  • 1May, 2019
  • 1October, 2022
Available data
  • 44bed bed3+
  • 20tsv
  • 9bigWig
  • 8bed bed9
  • 2bigBed bed9
Organism
  • 74Homo sapiens
Collection Tags
  • 18EpiMap
  • 10GTEx
  • 8ChIP-Atlas
  • 8ENCODE
  • 7DGA
  • 5KPMP
  • 4STARNET
  • 3CMDGA
  • 3T1D
  • 3T2D
  • 3eQTLCatalogue
  • 2AMP
Biosample type
  • 45tissue
  • 26primary cell
  • 3cell line
Organ
  • 2905vasculature
  • 2842blood vessel
  • 2834bodily fluid
  • 2824blood
  • 2657vein
  • 930epithelium
  • 646kidney
  • 455connective tissue
  • 419brain
  • 373musculature of body
  • 307lung
  • 281intestine
  • 271pancreas
  • 251heart
  • 242limb
  • 204embryo
  • 191skin of body
  • 169large intestine
  • 149liver
  • 141extraembryonic component
  • 118stomach
  • 105eye
  • 98adipose tissue
  • 84small intestine
  • 83bone element
  • 82mammary gland
  • 81uterus
  • 74artery
  • 73adrenal gland
  • 71prostate gland
  • 70placenta
  • 64ureter
  • 59penis
  • 58lymph node
  • 49gonad
  • 48thymus
  • 45esophagus
  • 43spinal cord
  • 34spleen
  • 25nerve
  • 25testis
  • 23lymphatic vessel
  • 23lymphoid tissue
  • 23ovary
  • 23thyroid gland
  • 19mouth
  • 18skeleton
  • 15bronchus
  • 13breast
  • 12pituitary gland
  • 11bone marrow
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 4nose
  • 3trachea
  • 1pericardium
Project
  • 69AMP
  • 5KPMP
Genome assembly (visualization)
  • 55hg19
  • 27GRCh38
annotation_type!
  • histone modifications
BIOSAMPLE
TYPE

74 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
chromatin state
target gene predictions
Fine-mapped variants
eQTL
binding sites
variant allelic effects
caQTL
differential activity
tissue
coronary artery331333221
tibial artery33132322
internal thoracic artery112
abdominal aorta artery1
primary cell
fibroblast of pulmonary artery12112
pulmonary artery endothelial cell12111
Afferent / Efferent Arteriole Endothelial Cell32
aortic endothelial cell21
smooth muscle cell of the coronary artery111
cell line
smooth muscle cell of the coronary artery111
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego