Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 4candidate regulatory elements
  • 3accessible chromatin
  • 3target gene predictions
  • 2binding sites
  • 2chromatin state
  • histone modifications
  • 1variant allelic effects
Date released
  • 6September, 2022
  • 4February, 2021
  • 2November, 2021
  • 1April, 2020
  • 1February, 2024
  • 1June, 2020
Available data
  • 13bed bed3+
  • 2bed bed9
  • 2bigWig
Organism
  • 15Homo sapiens
Collection Tags
  • 6EpiMap
  • 3ChIP-Atlas
  • 2AMP
  • 2ENCODE
  • 2T2DKP
  • 1DGA
Biosample type
  • 15primary cell
Organ
  • 3341blood
  • 2894vasculature
  • 2855blood vessel
  • 2828bodily fluid
  • 2658vein
  • 924epithelium
  • 855brain
  • 750kidney
  • 493connective tissue
  • 482heart
  • 436lung
  • 379musculature of body
  • 350intestine
  • 313pancreas
  • 283skin of body
  • 242limb
  • 226liver
  • 221large intestine
  • 204embryo
  • 169extraembryonic component
  • 157eye
  • 141adipose tissue
  • 139stomach
  • 111muscle organ
  • 102adrenal gland
  • 100bone element
  • 99mammary gland
  • 97small intestine
  • 94placenta
  • 92thymus
  • 91uterus
  • 83artery
  • 80prostate gland
  • 73ureter
  • 63gonad
  • 63spleen
  • 60__MARKER__
  • 59penis
  • 58lymph node
  • 49spinal cord
  • 48esophagus
  • 47thyroid gland
  • 32ovary
  • 30testis
  • 25nerve
  • 24skeleton
  • 23lymphoid tissue
  • 21mouth
  • 20lymphatic vessel
  • 15breast
  • 15bronchus
  • 13urinary bladder
  • 12pituitary gland
  • 12tongue
  • 12vagina
  • 11bone marrow
  • 4nose
  • 3trachea
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 12AMP
  • 2ENCODE
  • 1LungMap
Genome assembly (visualization)
  • 15hg19
  • 4GRCh38
annotation_type!
  • histone modifications
BIOSAMPLE
TYPE

15 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
binding sites
chromatin state
variant allelic effects
primary cell
bronchial epithelial cell41222
club cell21
bronchial goblet cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego