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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
256
gene expression
254
target gene predictions
247
candidate regulatory elements
222
accessible chromatin
127
chromatin state
92
differential activity
56
binding sites
41
variant allelic effects
histone modifications
5
eQTL
2
caQTL
Date released
369
September, 2022
244
February, 2021
155
September, 2023
129
November, 2021
127
February, 2024
40
May, 2021
38
March, 2023
33
June, 2020
20
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
11
October, 2022
10
May, 2024
9
February, 2020
8
April, 2020
7
March, 2020
6
August, 2018
5
March, 2024
5
October, 2019
4
August, 2017
2
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
822
bed bed3+
327
tsv
178
bigWig
123
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1302
Homo sapiens
Biosample type
833
primary cell
250
tissue
195
cell line
24
in vitro differentiated cells
Organ
931
epithelium
646
kidney
443
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
271
pancreas
261
vasculature
251
heart
242
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
144
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphatic vessel
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
988
AMP
155
KPMP
129
ENCODE
20
T1D
8
LungMap
2
community
Genome assembly (visualization)
948
hg19
368
GRCh38
annotation_type!
histone modifications
BIOSAMPLE
TYPE
1302 results
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Clear Filters
gene expression
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
7
3
15
2
2
1
2
hepatocyte
13
3
2
8
1
1
2
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
1
2
2
1
1
endothelial cell of umbilical vein
4
6
2
5
2
1
+ See 149 more…
tissue
lung
1
17
33
16
1
left lung
13
26
13
right lung
11
22
1
11
pigmented layer of retina
20
upper lobe of left lung
3
7
1
3
1
+ See 21 more…
cell line
HeLa-S3
55
5
3
1
A549
19
21
1
18
2
EndoC_BH1
8
1
8
3
1
IMR-90
2
2
1
1
2
PC-9
2
2
1
1
1
+ See 15 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 4 more…
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