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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
96
target gene predictions
69
candidate regulatory elements
36
chromatin state
10
accessible chromatin
6
binding sites
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
52
July, 2026
41
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
186
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
221
Homo sapiens
Collection Tags
99
EpiMap
52
ENCODE-rE2G
37
ENCODE
12
ChIP-Atlas
6
AMP
6
DGA
6
T2DKP
2
4DN
2
GTEx
2
T1D
2
T2D
2
eQTLCatalogue
Biosample type
160
tissue
55
cell line
6
primary cell
Organ
3341
blood
2894
vasculature
2855
blood vessel
2828
bodily fluid
2658
vein
924
epithelium
855
brain
750
kidney
493
connective tissue
482
heart
436
lung
379
musculature of body
350
intestine
313
pancreas
283
skin of body
242
limb
226
liver
221
large intestine
204
embryo
169
extraembryonic component
157
eye
141
adipose tissue
139
stomach
111
muscle organ
102
adrenal gland
100
bone element
99
mammary gland
97
small intestine
94
placenta
92
thymus
91
uterus
83
artery
80
prostate gland
73
ureter
63
gonad
63
spleen
60
__MARKER__
59
penis
58
lymph node
49
spinal cord
48
esophagus
47
thyroid gland
32
ovary
30
testis
25
nerve
24
skeleton
23
lymphoid tissue
21
mouth
20
lymphatic vessel
15
breast
15
bronchus
13
urinary bladder
12
pituitary gland
12
tongue
12
vagina
11
bone marrow
4
nose
3
trachea
1
embryonic structure
1
gallbladder
1
pericardium
Project
215
AMP
6
ENCODE
Genome assembly (visualization)
165
hg19
95
GRCh38
annotation_type!
histone modifications
BIOSAMPLE
TYPE
221 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
eQTL
gene expression
tissue
large intestine
28
27
13
1
sigmoid colon
10
10
5
1
transverse colon
9
8
4
1
1
colonic mucosa
4
4
3
mucosa of rectum
2
4
3
+ See 9 more…
cell line
HCT116
19
2
1
HT-29
3
2
1
1
1
SW480
2
2
1
1
1
Caco-2
3
1
HCT-116 cell
1
1
2
+ See 4 more…
primary cell
colon epithelial cell
3
3
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