Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
234
candidate regulatory elements
185
target gene predictions
125
chromatin state
38
accessible chromatin
15
binding sites
9
Fine-mapped variants
9
variant allelic effects
8
gene expression
histone modifications
7
eQTL
Date released
360
September, 2022
130
February, 2021
52
February, 2024
14
June, 2020
11
November, 2021
10
March, 2020
10
May, 2020
9
May, 2021
7
January, 2020
6
February, 2020
5
October, 2022
4
January, 2022
4
March, 2024
3
April, 2020
2
May, 2019
2
November, 2019
1
August, 2017
Available data
482
bed bed3+
124
bed bed9
24
bigWig
20
tsv
4
bigBed bed9
Organism
630
Homo sapiens
Biosample type
427
tissue
164
cell line
39
primary cell
Organ
931
epithelium
646
kidney
443
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
271
pancreas
261
vasculature
251
heart
242
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
144
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphatic vessel
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
616
AMP
11
ENCODE
3
LungMap
Genome assembly (visualization)
618
hg19
216
GRCh38
annotation_type!
histone modifications
BIOSAMPLE
TYPE
630 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
Fine-mapped variants
variant allelic effects
gene expression
eQTL
tissue
lung
33
17
16
1
1
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
left lung
26
13
13
right lung
22
11
11
1
+ See 26 more…
cell line
HeLa-S3
5
55
3
1
A549
21
19
18
1
2
IMR-90
2
2
1
1
2
PC-9
2
2
1
1
1
WI38
5
1
1
+ See 6 more…
primary cell
fibroblast of lung
6
4
4
2
type II pneumocyte
2
4
1
lung microvascular endothelial cell
3
1
1
type I pneumocyte
1
3
Ishikawa
1
1
+ See 4 more…
See all biosamples
Download