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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
70
candidate regulatory elements
54
gene expression
51
accessible chromatin
50
target gene predictions
47
chromatin state
28
binding sites
histone modifications
19
differential activity
17
variant allelic effects
12
eQTL
9
Fine-mapped variants
4
caQTL
Date released
110
September, 2022
60
February, 2021
35
September, 2023
32
February, 2024
19
March, 2020
17
January, 2020
15
May, 2020
10
June, 2020
9
November, 2021
8
August, 2021
6
February, 2020
6
May, 2021
5
October, 2022
4
August, 2017
4
February, 2023
4
March, 2023
3
April, 2020
3
January, 2022
3
November, 2019
2
May, 2022
2
October, 2019
1
July, 2020
1
March, 2024
1
May, 2019
1
September, 2018
Available data
220
bed bed3+
79
tsv
46
bigWig
43
bed bed9
8
bigBed bed9
3
csv
2
txt
1
bam
Organism
361
Homo sapiens
Biosample type
204
primary cell
120
tissue
28
cell line
9
in vitro differentiated cells
Organ
921
epithelium
646
kidney
435
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
271
pancreas
258
vasculature
249
heart
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
142
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
20
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
314
AMP
35
KPMP
9
ENCODE
3
LungMap
Genome assembly (visualization)
277
hg19
113
GRCh38
2
hg18
annotation_type!
histone modifications
organ_slims!
limb
nerve
BIOSAMPLE
TYPE
361 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
binding sites
differential activity
variant allelic effects
eQTL
Fine-mapped variants
caQTL
primary cell
hepatocyte
1
13
8
3
1
1
2
endothelial cell of umbilical vein
6
2
4
5
2
1
endothelial cell of hepatic sinusoid
4
6
6
dermis blood vessel endothelial cell
6
2
2
hepatic stellate cell
1
1
3
1
1
1
+ See 30 more…
tissue
liver
13
1
4
10
9
1
1
7
1
coronary artery
3
1
3
3
3
2
2
3
1
ascending aorta
4
1
1
2
3
1
1
3
aorta
4
1
4
4
thoracic aorta
4
1
2
3
1
+ See 4 more…
cell line
HepG2
2
2
3
2
3
HuH-7
1
1
1
1
1
HuH-7.5
1
1
1
smooth muscle cell of the coronary artery
1
1
1
choroid plexus epithelial cell
1
1
+ See 3 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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