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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
67
accessible chromatin
49
gene expression
48
target gene predictions
33
differential activity
30
candidate regulatory elements
22
chromatin state
15
eQTL
12
variant allelic effects
8
binding sites
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
50
September, 2022
47
March, 2023
34
May, 2021
31
February, 2021
25
February, 2024
20
January, 2021
18
November, 2021
10
March, 2020
8
August, 2021
8
May, 2020
7
August, 2018
6
January, 2020
6
October, 2019
5
June, 2020
4
August, 2017
4
January, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
1
October, 2022
Available data
169
bed bed3+
77
tsv
58
bigWig
17
bed bed9
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
293
Homo sapiens
Biosample type
143
primary cell
113
tissue
34
cell line
3
in vitro differentiated cells
Organ
921
epithelium
646
kidney
435
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
271
pancreas
258
vasculature
249
heart
242
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
142
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
ureter
59
penis
58
lymph node
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
20
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
253
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
200
hg19
66
GRCh38
annotation_type!
histone modifications
organ_slims!
gonad
ureter
BIOSAMPLE
TYPE
293 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
binding sites
Fine-mapped variants
sQTL
variant to gene
primary cell
endothelial cell of umbilical vein
2
4
6
5
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic ductal cell
6
3
3
3
1
1
pancreatic acinar cell
6
3
3
3
1
+ See 13 more…
tissue
islet of Langerhans
6
11
1
3
13
1
2
2
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
endocrine pancreas
4
7
4
pancreatic ductal cell
2
+ See 7 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic ductal cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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