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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • histone modifications
  • 913accessible chromatin
  • 726binding sites
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 1750February, 2021
  • 1672September, 2022
  • 373February, 2024
  • 333November, 2021
  • 289June, 2020
  • 286September, 2023
  • 270May, 2021
  • 152May, 2020
  • 128March, 2020
  • 111August, 2021
  • 106January, 2022
  • 83January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 15May, 2022
  • 13November, 2019
  • 10October, 2022
  • 9August, 2018
  • 9October, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 4977bed bed3+
  • 3576tsv
  • 544bigWig
  • 108txt
  • 26csv
  • 16bigBed narrowPeak
  • 3bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 8608Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1666EpiMap
  • 1007ChIP-Atlas
  • 875ENCODE
  • 636DGA
  • 511AMP
  • 401T2DKP
  • 307T1D
  • 281KPMP
  • 174 T2DKP
  • 1744DN
  • 151GTEx
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 83BLUEPRINT
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
Biosample type
  • 4723tissue
  • 2087primary cell
  • 1509cell line
  • 332in vitro differentiated cells
  • 3stem cell
Organ
  • 2868vasculature
  • 2812blood vessel
  • 2788bodily fluid
  • 2780blood
  • 2651vein
  • 872epithelium
  • 567kidney
  • 396connective tissue
  • 341brain
  • 298musculature of body
  • 254pancreas
  • 232lung
  • 221intestine
  • 200heart
  • 192limb
  • 175embryo
  • 152skin of body
  • 132large intestine
  • 131liver
  • 107extraembryonic component
  • 94eye
  • 94stomach
  • 88adipose tissue
  • 76uterus
  • 67bone element
  • 65artery
  • 64mammary gland
  • 64small intestine
  • 59adrenal gland
  • 58prostate gland
  • 53placenta
  • 51ureter
  • 48lymph node
  • 47penis
  • 40gonad
  • 38esophagus
  • 37thymus
  • 34spinal cord
  • 28spleen
  • 21lymphatic vessel
  • 21nerve
  • 20testis
  • 19ovary
  • 19thyroid gland
  • 18lymphoid tissue
  • 15mouth
  • 15skeleton
  • 13bronchus
  • 12pituitary gland
  • 11breast
  • 9bone marrow
  • 8tongue
  • 8urinary bladder
  • 8vagina
  • 3nose
  • 3trachea
  • 1pericardium
Project
  • 7945AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4991hg19
  • 935GRCh38
  • 4hg18
annotation_type!
  • histone modifications
software_used.software.name!
  • chromhmm
BIOSAMPLE
TYPE

8656 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart37205132
stomach4021311
kidney2914101711
brain291621121
primary cell
monocyte2181154121
common myeloid progenitor, CD34-positive2714
endothelial cell371529122
B cell171062
macrophage331229311
cell line
HeLa-S3555
H1-hESC139118
A549211911
K56272311
EndoC_BH1181831
in vitro differentiated cells
hematopoietic multipotent progenitor cell1910111
neural progenitor cell55107
adipocyte46411
cardiomyocytes11
extended pluripotent stem (EPS) cells9
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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