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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2639pQTL
  • histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • 876candidate regulatory elements
  • 817binding sites
  • 524target gene predictions
  • 186eQTL
  • 141variant allelic effects
  • 130differential activity
  • 84Fine-mapped variants
  • 15gene expression
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 1573February, 2021
  • 840September, 2022
  • 333November, 2021
  • 312February, 2024
  • 289June, 2020
  • 185May, 2021
  • 155May, 2020
  • 117March, 2020
  • 115September, 2023
  • 106January, 2022
  • 101October, 2022
  • 72January, 2020
  • 58August, 2021
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 26February, 2020
  • 19April, 2020
  • 15March, 2023
  • 14November, 2019
  • 14October, 2019
  • 9May, 2019
  • 8April, 2019
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 3438bed bed3+
  • 2903tsv
  • 869bed bed9
  • 546bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 7257Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1007ChIP-Atlas
  • 938ENCODE
  • 833EpiMap
  • 438DGA
  • 403AMP
  • 399T2DKP
  • 213T1D
  • 1744DN
  • 130 T2DKP
  • 111T2D
  • 110KPMP
  • 101eQTLCatalogue
  • 100CMDGA
  • 96GTEx
  • 79BLUEPRINT
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12HPAP
Biosample type
  • 4202tissue
  • 1476primary cell
  • 1389cell line
  • 232in vitro differentiated cells
  • 4stem cell
Organ
  • 2822vasculature
  • 2782bodily fluid
  • 2780blood vessel
  • 2777blood
  • 2652vein
  • 563epithelium
  • 320connective tissue
  • 294kidney
  • 280brain
  • 226musculature of body
  • 168intestine
  • 166lung
  • 165pancreas
  • 158heart
  • 145limb
  • 140embryo
  • 121skin of body
  • 102liver
  • 101large intestine
  • 86eye
  • 75extraembryonic component
  • 71uterus
  • 70stomach
  • 69adipose tissue
  • 54artery
  • 54mammary gland
  • 51bone element
  • 46small intestine
  • 44adrenal gland
  • 44prostate gland
  • 42lymph node
  • 39penis
  • 38placenta
  • 38ureter
  • 31gonad
  • 29esophagus
  • 26spinal cord
  • 26thymus
  • 21spleen
  • 17nerve
  • 16lymphatic vessel
  • 16testis
  • 14ovary
  • 14thyroid gland
  • 12lymphoid tissue
  • 12skeleton
  • 11bronchus
  • 11pituitary gland
  • 10mouth
  • 9bone marrow
  • 8breast
  • 5tongue
  • 5urinary bladder
  • 5vagina
  • 3trachea
  • 2nose
Project
  • 6765AMP
  • 333ENCODE
  • 110KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4344hg19
  • 1804GRCh38
  • 4hg18
annotation_type!
  • histone modifications
software_used.software.name!
  • r
BIOSAMPLE
TYPE

7305 results

search-icontable-tab-icon
Clear Filters
pQTL
chromatin state
accessible chromatin
candidate regulatory elements
binding sites
target gene predictions
eQTL
variant allelic effects
differential activity
Fine-mapped variants
gene expression
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
heart21518112
stomach1932121
kidney161015111
brain18213121
primary cell
endothelial cell15327122
fibroblast1631426
macrophage12339311
monocyte18124121
common myeloid progenitor, CD34-positive13141
cell line
HeLa-S332152
H1-hESC11238
K562711217
A549181321
HFFc619
in vitro differentiated cells
hematopoietic multipotent progenitor cell10191
adipocyte64214
neural progenitor cell41011
embryonic stem cell5611
dendritic cell6
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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