Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • histone modifications
  • 839accessible chromatin
  • 724binding sites
  • 5hQTL
  • 1other
Date released
  • 729February, 2021
  • 289June, 2020
  • 222November, 2021
  • 65January, 2020
  • 54February, 2024
  • 44November, 2022
  • 32May, 2021
  • 30August, 2021
  • 28January, 2021
  • 25February, 2023
  • 14May, 2022
  • 12November, 2019
  • 9October, 2019
  • 6September, 2022
  • 4January, 2022
  • 3September, 2018
  • 2November, 2020
  • 1June, 2021
Available data
  • 1557bed bed3+
  • 456bigWig
  • 9bigBed narrowPeak
  • 3bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 1569Homo sapiens
Collection Tags
  • 1007ChIP-Atlas
  • 255T2DKP
  • 250AMP
  • 76CMDGA
  • 73DGA
  • 55T1D
  • 33 T2DKP
  • 19BLUEPRINT
  • 12HPAP
  • 10T2D
  • 6ENCODE
Biosample type
  • 737cell line
  • 500primary cell
  • 225tissue
  • 107in vitro differentiated cells
Organ
  • 242epithelium
  • 105connective tissue
  • 67pancreas
  • 63eye
  • 52kidney
  • 50brain
  • 49vasculature
  • 39bodily fluid
  • 38blood
  • 37blood vessel
  • 35liver
  • 33musculature of body
  • 31heart
  • 27skin of body
  • 26intestine
  • 24embryo
  • 22bone element
  • 22limb
  • 18lymph node
  • 17lung
  • 16artery
  • 16mammary gland
  • 15large intestine
  • 13prostate gland
  • 11extraembryonic component
  • 9adipose tissue
  • 8penis
  • 8skeleton
  • 8stomach
  • 7adrenal gland
  • 7gonad
  • 6placenta
  • 6uterus
  • 5lymphatic vessel
  • 4bone marrow
  • 4bronchus
  • 4esophagus
  • 4testis
  • 4ureter
  • 3nerve
  • 3small intestine
  • 3spinal cord
  • 3spleen
  • 3thymus
  • 3trachea
  • 3vein
  • 2lymphoid tissue
  • 2ovary
  • 2thyroid gland
  • 1breast
  • 1mouth
  • 1nose
  • 1tongue
  • 1urinary bladder
Project
  • 1319AMP
  • 222ENCODE
  • 28T1D
Genome assembly (visualization)
  • 1561hg19
  • 389GRCh38
annotation_type!
  • histone modifications
BIOSAMPLE
TYPE

1569 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
binding sites
hQTL
other
cell line
EndoC_BH181
breast cancer cell9
fibroblast cell line16
melanoma7
prostate cancer cell line5
primary cell
monocyte1612
endothelial cell152
fibroblast16
endothelial cell of hepatic sinusoid66
excitatory neuron12
tissue
retina231
pigmented layer of retina20
kidney101
heart51
pancreas51
in vitro differentiated cells
neural progenitor cell10
embryonic stem cell61
retinal pigment epithelial cell6
SGBS preadipocytes5
adipocyte41
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego