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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
21
candidate regulatory elements
21
gene expression
20
target gene predictions
19
accessible chromatin
16
chromatin state
14
histone modifications
13
binding sites
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
43
September, 2022
26
February, 2024
25
February, 2021
10
August, 2021
10
March, 2020
June, 2020
5
November, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
93
bed bed3+
25
tsv
23
bigWig
13
bed bed9
1
bam
1
bigBed bed9
Organism
144
Homo sapiens
Biosample type
61
primary cell
57
tissue
26
cell line
in vitro differentiated cells
Organ
901
epithelium
637
kidney
441
brain
393
connective tissue
367
musculature of body
305
lung
279
intestine
270
pancreas
259
vasculature
249
heart
238
limb
206
bodily fluid
200
blood vessel
195
blood
191
skin of body
175
embryo
167
large intestine
144
liver
135
extraembryonic component
116
stomach
97
eye
87
adipose tissue
84
bone element
83
small intestine
81
mammary gland
81
uterus
73
prostate gland
72
adrenal gland
72
artery
placenta
63
ureter
57
penis
54
lymph node
48
thymus
46
gonad
43
esophagus
41
spinal cord
33
spleen
24
nerve
24
testis
22
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
lymphatic vessel
18
mouth
18
skeleton
15
bronchus
13
bone marrow
13
pituitary gland
12
breast
10
vagina
9
tongue
9
urinary bladder
4
trachea
1
pericardium
Project
139
AMP
5
ENCODE
Genome assembly (visualization)
115
hg19
59
GRCh38
2
hg18
annotation_type!
other
biosample_type!
in vitro differentiated cells
month_released!
June, 2020
organ_slims!
placenta
BIOSAMPLE
TYPE
144 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
chromatin state
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
1
13
3
7
1
4
1
2
endothelial cell of hepatic sinusoid
4
6
6
hepatic stellate cell
1
1
1
2
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
13
1
10
3
9
2
1
7
1
1
right lobe of liver
2
1
1
1
1
3
cell line
HepG2
2
3
1
2
5
3
HuH-7
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
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