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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • pQTL
  • 971histone modifications
  • 907accessible chromatin
  • 877candidate regulatory elements
  • 817binding sites
  • 689gene expression
  • 523target gene predictions
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 111chromatin state
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2590February, 2021
  • September, 2022
  • 389May, 2021
  • 378February, 2024
  • 333November, 2021
  • 289June, 2020
  • 286September, 2023
  • 155May, 2020
  • 128March, 2020
  • 125August, 2021
  • 106January, 2022
  • 101October, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2February, 2025
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 4404bed bed3+
  • 939tsv
  • 542bigWig
  • 108txt
  • 40bigBed bed9
  • 36bed bed9
  • 34bed bed9+
  • 26csv
  • 15bigBed narrowPeak
  • 1bam
Organism
  • 5469Homo sapiens
Collection Tags
  • 1847ChIP-Atlas
  • 966ENCODE
  • 645DGA
  • 524AMP
  • 421T1D
  • 403T2DKP
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 173 T2DKP
  • 151GTEx
  • 108T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 1EpiMap
Biosample type
  • 2030primary cell
  • 1810cell line
  • 1306tissue
  • 365in vitro differentiated cells
  • 4stem cell
Organ
  • 807epithelium
  • 427kidney
  • 358connective tissue
  • 287brain
  • 233pancreas
  • 203vasculature
  • 176musculature of body
  • 153blood vessel
  • 149heart
  • 146bodily fluid
  • 142blood
  • 134embryo
  • 125intestine
  • 117liver
  • 106limb
  • 102skin of body
  • 101lung
  • 82eye
  • 76large intestine
  • 75adipose tissue
  • 71uterus
  • 58artery
  • 50stomach
  • 47bone element
  • 47extraembryonic component
  • 45mammary gland
  • 39prostate gland
  • 38lymph node
  • 34penis
  • 31adrenal gland
  • 27small intestine
  • 26gonad
  • 25placenta
  • 25ureter
  • 24esophagus
  • 19spinal cord
  • 18lymphatic vessel
  • 17vein
  • 16nerve
  • 16spleen
  • 16thymus
  • 14testis
  • 13pituitary gland
  • 11ovary
  • 11thyroid gland
  • 10bone marrow
  • 10bronchus
  • 9lymphoid tissue
  • 9skeleton
  • 7breast
  • 7mouth
  • 5trachea
  • 4tongue
  • 4urinary bladder
  • 4vagina
  • 1nose
  • 1pericardium
Project
  • 4808AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 3ITG
Genome assembly (visualization)
  • 4488hg19
  • 1070GRCh38
  • 4hg18
annotation_type!
  • pQTL
month_released!
  • September, 2022
BIOSAMPLE
TYPE

5517 results

search-icontable-tab-icon
Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
gene expression
target gene predictions
eQTL
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
primary cell
monocyte861811524121
CD8-positive, alpha-beta T cell3047351
endothelial cell1153297122
macrophage123239311
fibroblast1631426
cell line
HeLa-S32152
H1-hESC112838
EndoC_BH11818131
K5621112171
breast cancer cell119
tissue
islet of Langerhans1521111313222
kidney2101517112
heart151813122
liver24612392211
retina12331111
in vitro differentiated cells
neural progenitor cell1510171
adipocyte1421144
embryonic stem cell16115
hematopoietic multipotent progenitor cell11911
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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