Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
78
accessible chromatin
68
target gene predictions
65
gene expression
62
candidate regulatory elements
37
differential activity
35
chromatin state
29
eQTL
14
variant allelic effects
11
Fine-mapped variants
10
binding sites
8
histone modifications
2
sQTL
2
variant to gene
Date released
92
September, 2022
69
February, 2021
47
March, 2023
37
May, 2021
27
February, 2024
21
November, 2021
20
January, 2021
18
March, 2020
14
August, 2021
9
May, 2020
8
January, 2020
8
January, 2022
7
August, 2018
7
February, 2020
7
June, 2020
6
October, 2019
5
August, 2017
5
September, 2023
3
November, 2019
2
January, 2018
2
September, 2018
1
April, 2019
1
April, 2020
1
February, 2023
1
June, 2021
1
March, 2024
1
November, 2022
Available data
248
bed bed3+
104
tsv
66
bigWig
29
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
bigBed bed9
3
csv
3
xls
Organism
421
Homo sapiens
Biosample type
232
tissue
144
primary cell
39
cell line
6
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
217
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
372
AMP
21
ENCODE
20
T1D
5
KPMP
2
community
1
LungMap
Genome assembly (visualization)
303
hg19
97
GRCh38
2
hg18
annotation_type!
pQTL
BIOSAMPLE
TYPE
421 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
differential activity
chromatin state
eQTL
variant allelic effects
Fine-mapped variants
binding sites
histone modifications
sQTL
variant to gene
tissue
islet of Langerhans
6
1
11
3
13
1
2
2
1
2
2
spleen
2
8
1
15
6
1
1
adipose tissue
2
8
3
7
6
4
1
1
body of pancreas
5
2
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
+ See 15 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 17 more…
cell line
EndoC_BH1
8
1
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 4 more…
in vitro differentiated cells
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
white adipose cell
1
See all biosamples
Download