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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
113
candidate regulatory elements
65
target gene predictions
59
chromatin state
10
accessible chromatin
8
histone modifications
6
binding sites
4
gene expression
3
eQTL
3
variant allelic effects
Date released
164
September, 2022
71
February, 2021
November, 2021
10
June, 2020
6
February, 2024
6
May, 2021
4
August, 2017
3
January, 2022
3
March, 2024
2
March, 2020
1
February, 2020
1
October, 2022
Available data
209
bed bed3+
55
bed bed9
3
tsv
Organism
271
Homo sapiens
Biosample type
232
tissue
34
cell line
5
primary cell
Organ
822
epithelium
649
kidney
466
brain
409
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
258
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
88
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
271
AMP
Genome assembly (visualization)
264
hg19
60
GRCh38
annotation_type!
representative DNase hypersensitivity sites
month_released!
January, 2018
November, 2021
BIOSAMPLE
TYPE
271 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
gene expression
eQTL
variant allelic effects
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
Peyer's patch
7
3
3
1
+ See 15 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
enterocyte
3
intestinal epithelial cell
1
pericardium fibroblast
1
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