Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1245
candidate regulatory elements
851
target gene predictions
694
chromatin state
624
accessible chromatin
551
gene expression
294
histone modifications
143
eQTL
132
binding sites
127
differential activity
119
variant allelic effects
69
Fine-mapped variants
13
caQTL
5
hQTL
3
meQTL
3
pQTL
sQTL
2
other
2
variant to gene
Date released
1829
September, 2022
1069
February, 2021
315
November, 2021
281
September, 2023
267
May, 2021
156
February, 2024
141
May, 2020
112
June, 2020
101
March, 2020
89
January, 2022
81
January, 2020
77
August, 2021
62
February, 2020
42
May, 2022
36
January, 2021
31
October, 2022
30
February, 2023
29
March, 2024
26
November, 2022
22
August, 2017
19
April, 2020
16
March, 2023
9
May, 2019
9
November, 2019
7
April, 2019
6
October, 2019
3
November, 2020
3
September, 2018
2
August, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
January, 2018
1
July, 2020
Available data
3306
bed bed3+
739
tsv
640
bed bed9
474
bigWig
108
txt
33
bigBed bed9
27
bed bed9+
2
bigBed narrowPeak
1
bam
Organism
4830
Homo sapiens
Biosample type
2535
tissue
2342
primary cell
2317
cell line
467
in vitro differentiated cells
4
stem cell
Organ
880
epithelium
610
kidney
384
brain
376
connective tissue
356
musculature of body
255
intestine
253
vasculature
245
heart
pancreas
237
limb
215
lung
198
blood vessel
140
large intestine
138
extraembryonic component
125
skin of body
120
liver
119
stomach
93
eye
84
small intestine
83
adipose tissue
73
adrenal gland
71
artery
70
placenta
64
ureter
57
embryo
49
thymus
48
mammary gland
45
esophagus
43
gonad
43
penis
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
21
vein
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
17
lymphatic vessel
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
3
pituitary gland
1
pericardium
Project
4216
AMP
315
ENCODE
281
KPMP
39
T1D
19
LungMap
5
ITG
2
community
Genome assembly (visualization)
4096
hg19
1384
GRCh38
hg18
annotation_type!
sQTL
assembly!
hg18
organ_slims!
pancreas
BIOSAMPLE
TYPE
4877 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
eQTL
binding sites
differential activity
variant allelic effects
Fine-mapped variants
caQTL
hQTL
meQTL
pQTL
other
variant to gene
tissue
heart
37
20
21
5
3
1
1
2
stomach
40
21
19
3
1
1
1
kidney
29
14
16
10
7
2
1
1
1
brain
29
16
18
2
1
3
2
1
1
lung
33
17
16
1
1
+ See 250 more…
primary cell
monocyte
2
18
15
86
4
1
2
1
common myeloid progenitor, CD34-positive
27
14
13
CD8-positive, alpha-beta T cell
7
5
1
4
3
30
B cell
14
10
8
6
2
endothelial cell
7
15
9
1
1
2
2
2
+ See 432 more…
See all biosamples
Download