Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
70
accessible chromatin
60
target gene predictions
52
candidate regulatory elements
33
chromatin state
33
gene expression
21
binding sites
15
histone modifications
12
differential activity
11
variant allelic effects
6
eQTL
1
caQTL
Date released
81
September, 2022
63
February, 2021
50
November, 2021
17
September, 2023
14
February, 2024
13
June, 2020
13
May, 2021
10
October, 2022
7
March, 2023
6
November, 2022
5
August, 2017
5
February, 2020
5
May, 2020
3
April, 2020
3
January, 2020
3
January, 2022
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
1
August, 2018
1
August, 2021
1
June, 2021
1
March, 2020
Available data
235
bed bed3+
45
bigWig
39
tsv
28
bed bed9
7
txt
1
bigBed bed9
1
bigBed narrowPeak
Organism
314
Homo sapiens
Biosample type
264
primary cell
95
tissue
50
in vitro differentiated cells
31
cell line
1
stem cell
Organ
845
epithelium
333
connective tissue
310
kidney
vasculature
129
pancreas
114
blood vessel
109
skin of body
70
liver
52
embryo
52
musculature of body
49
mammary gland
47
penis
45
extraembryonic component
39
brain
34
lung
32
heart
29
artery
29
eye
23
intestine
20
vein
19
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
nose
4
small intestine
4
spinal cord
3
thyroid gland
2
adipose tissue
2
ovary
1
limb
1
pericardium
1
testis
1
thymus
Project
242
AMP
50
ENCODE
15
KPMP
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
265
hg19
88
GRCh38
annotation_type!
sQTL
organ_slims!
vasculature
BIOSAMPLE
TYPE
314 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
gene expression
binding sites
histone modifications
differential activity
variant allelic effects
eQTL
caQTL
primary cell
fibroblast
16
4
1
6
2
pericyte cell
10
10
1
1
osteoblast
5
2
2
1
2
3
2
fibroblast of lung
4
6
4
2
foreskin fibroblast
1
2
6
1
4
2
+ See 41 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
See all biosamples
Download