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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1008
candidate regulatory elements
578
target gene predictions
549
chromatin state
183
gene expression
183
histone modifications
135
accessible chromatin
114
eQTL
74
Fine-mapped variants
74
binding sites
54
variant allelic effects
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
sQTL
1
other
1
representative DNase hypersensitivity sites
Date released
1469
September, 2022
818
February, 2021
114
March, 2020
83
June, 2020
69
August, 2021
69
May, 2021
60
May, 2020
55
January, 2022
48
February, 2020
45
February, 2024
27
March, 2024
24
November, 2022
23
August, 2017
22
January, 2020
8
April, 2019
7
February, 2023
7
May, 2019
5
March, 2023
4
September, 2023
3
October, 2019
2
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
1
November, 2019
Available data
2182
bed bed3+
522
bed bed9
286
tsv
bigWig
36
bigBed bed9
24
csv
1
bam
Organism
2966
Homo sapiens
Biosample type
2510
tissue
2348
cell line
2056
primary cell
458
in vitro differentiated cells
4
stem cell
Organ
340
brain
304
musculature of body
285
kidney
232
intestine
222
limb
200
heart
181
lung
136
connective tissue
134
large intestine
108
stomach
103
extraembryonic component
99
pancreas
80
adipose tissue
80
small intestine
78
vasculature
76
blood vessel
65
embryo
64
epithelium
63
liver
62
adrenal gland
61
ureter
60
placenta
48
thymus
45
eye
39
gonad
36
artery
36
spinal cord
35
esophagus
34
skin of body
33
spleen
23
nerve
21
ovary
thyroid gland
18
lymphoid tissue
18
testis
15
prostate gland
14
bone element
13
breast
13
uterus
11
mouth
10
skeleton
10
tongue
10
urinary bladder
10
vagina
8
penis
5
mammary gland
4
bodily fluid
4
nose
3
blood
3
pituitary gland
2
lymphatic vessel
1
vein
Project
2963
AMP
5
ITG
Genome assembly (visualization)
2694
hg19
696
GRCh38
3
hg18
annotation_type!
sQTL
files.file_type!
bigWig
organ_slims!
thyroid gland
BIOSAMPLE
TYPE
2968 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
gene expression
histone modifications
accessible chromatin
eQTL
Fine-mapped variants
binding sites
variant allelic effects
differential activity
variant to gene
pQTL
caQTL
other
representative DNase hypersensitivity sites
tissue
heart
37
20
21
3
1
2
1
2
stomach
40
21
19
1
1
3
1
brain
29
16
18
1
3
1
2
1
1
kidney
29
14
15
7
2
1
1
1
1
lung
33
17
16
1
1
+ See 240 more…
in vitro differentiated cells
neural progenitor cell
5
5
4
7
15
10
hematopoietic multipotent progenitor cell
19
10
10
1
1
1
1
adipocyte
4
6
6
1
1
3
1
embryonic stem cell
1
5
1
6
1
cardiomyocytes
11
+ See 120 more…
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