Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
323
accessible chromatin
271
candidate regulatory elements
256
target gene predictions
193
histone modifications
70
binding sites
40
variant allelic effects
9
caQTL
4
eQTL
3
chromatin state
3
hQTL
2
meQTL
1
other
Date released
255
February, 2021
236
September, 2022
202
November, 2021
170
May, 2021
71
May, 2020
55
February, 2024
38
June, 2020
36
January, 2021
29
May, 2024
25
October, 2022
12
April, 2020
11
May, 2022
10
January, 2020
9
November, 2022
5
August, 2021
3
August, 2017
3
February, 2023
2
January, 2022
2
November, 2020
1
June, 2021
Available data
1175
bed bed3+
286
tsv
257
bigWig
120
bed bed9
30
txt
27
bed bed9+
2
bigBed bed9
2
bigBed narrowPeak
Organism
1130
Homo sapiens
Biosample type
2094
cell line
1780
tissue
1175
primary cell
330
in vitro differentiated cells
4
stem cell
Organ
epithelium
216
connective tissue
107
vasculature
83
skin of body
71
blood vessel
70
pancreas
52
kidney
41
musculature of body
40
liver
39
mammary gland
35
penis
32
extraembryonic component
31
brain
30
lung
26
heart
23
intestine
20
artery
20
eye
18
embryo
15
vein
14
bronchus
13
lymphatic vessel
12
bone element
11
adrenal gland
11
bone marrow
11
stomach
9
blood
9
bodily fluid
esophagus
9
placenta
8
prostate gland
6
large intestine
5
trachea
5
uterus
4
small intestine
3
gonad
3
mouth
3
spinal cord
3
thyroid gland
2
ovary
1
limb
1
thymus
Project
922
AMP
202
ENCODE
39
T1D
12
LungMap
Genome assembly (visualization)
1170
hg19
359
GRCh38
annotation_type!
sQTL
organ_slims!
epithelium
esophagus
BIOSAMPLE
TYPE
1175 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
histone modifications
binding sites
variant allelic effects
caQTL
eQTL
chromatin state
hQTL
meQTL
other
primary cell
monocyte
18
2
86
1
1
1
CD8-positive, alpha-beta T cell
4
7
5
30
common myeloid progenitor, CD34-positive
27
14
B cell
6
17
10
fibroblast
16
3
4
1
6
+ See 232 more…
See all biosamples
Download