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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
219
accessible chromatin
139
target gene predictions
131
candidate regulatory elements
49
binding sites
38
histone modifications
38
variant allelic effects
5
chromatin state
3
caQTL
2
eQTL
Date released
131
September, 2022
130
February, 2021
128
November, 2021
58
February, 2024
28
June, 2020
20
January, 2021
19
May, 2021
15
November, 2022
13
January, 2020
12
August, 2021
12
May, 2020
11
February, 2023
11
May, 2024
7
April, 2020
7
October, 2022
5
August, 2017
5
March, 2020
5
October, 2019
4
May, 2022
2
November, 2019
1
September, 2018
Available data
624
bed bed3+
332
tsv
181
bigWig
78
txt
62
bed bed9
14
bigBed narrowPeak
6
csv
4
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
624
Homo sapiens
Biosample type
462
primary cell
89
tissue
56
cell line
17
in vitro differentiated cells
Organ
557
epithelium
338
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
heart
175
limb
166
vasculature
165
skin of body
158
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
103
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
lymphatic vessel
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
469
AMP
128
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
622
hg19
195
GRCh38
1
hg18
annotation_type!
sQTL
BIOSAMPLE
TYPE
624 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
binding sites
histone modifications
variant allelic effects
chromatin state
caQTL
eQTL
primary cell
endothelial cell
15
7
3
2
1
2
2
1
hepatocyte
8
3
2
1
4
2
endothelial cell of umbilical vein
2
4
6
2
1
foreskin keratinocyte
4
11
keratinocyte
2
5
3
1
2
1
1
+ See 95 more…
tissue
liver
4
10
13
1
2
1
1
pigmented layer of retina
20
breast epithelium
1
3
5
esophagus squamous epithelium
1
2
6
right lobe of liver
1
2
+ See 14 more…
cell line
HepG2
2
3
2
3
5
1
EndoC_BH1
8
1
1
HuH-7
1
1
1
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
+ See 10 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
1
2
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
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