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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
120
candidate regulatory elements
111
accessible chromatin
104
target gene predictions
73
gene expression
69
chromatin state
43
binding sites
38
histone modifications
29
eQTL
19
variant allelic effects
18
differential activity
9
Fine-mapped variants
3
caQTL
2
pQTL
Date released
178
September, 2022
136
February, 2021
54
November, 2021
48
February, 2024
26
June, 2020
21
August, 2021
19
March, 2020
19
May, 2021
17
September, 2023
13
October, 2022
12
January, 2020
12
May, 2020
11
February, 2020
11
March, 2023
11
May, 2024
10
August, 2017
7
January, 2022
7
November, 2022
5
May, 2022
3
April, 2020
3
November, 2020
3
September, 2018
2
January, 2021
2
October, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
March, 2024
1
November, 2019
Available data
450
bed bed3+
93
tsv
76
bigWig
59
bed bed9
7
txt
3
bigBed bed9
3
csv
1
bam
1
bigBed narrowPeak
Organism
638
Homo sapiens
Biosample type
346
primary cell
171
tissue
63
cell line
57
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
275
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
558
AMP
54
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
534
hg19
194
GRCh38
4
hg18
annotation_type!
sQTL
BIOSAMPLE
TYPE
638 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
gene expression
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
hepatocyte
2
8
3
13
1
1
4
2
fibroblast
3
16
4
1
2
6
pericyte cell
3
10
10
1
osteoblast
2
5
2
2
1
3
2
endothelial cell of hepatic sinusoid
6
4
6
+ See 48 more…
tissue
liver
13
4
10
1
9
1
2
7
1
1
adipose tissue
7
2
8
3
6
1
4
1
subcutaneous adipose tissue
2
2
5
1
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
Peyer's patch
7
1
3
3
+ See 11 more…
cell line
HepG2
2
2
3
2
3
5
GM23248
2
1
1
1
1
1
GM18507
1
1
2
1
1
HuH-7
1
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
+ See 11 more…
in vitro differentiated cells
adipocyte
4
4
6
1
6
1
1
mesenchymal stem cell
3
1
3
2
1
1
chondrocyte
5
hepatocyte
2
1
1
hepatocyte(AFP)
3
+ See 10 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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