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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
target gene predictions
872
histone modifications
810
binding sites
674
gene expression
521
accessible chromatin
167
differential activity
variant allelic effects
75
chromatin state
42
eQTL
6
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
1
representative DNase hypersensitivity sites
Date released
2576
February, 2021
838
September, 2022
289
June, 2020
281
September, 2023
153
May, 2021
106
February, 2024
96
October, 2022
91
August, 2021
70
March, 2023
47
May, 2020
44
November, 2022
43
May, 2022
39
February, 2020
35
August, 2017
30
March, 2024
28
January, 2021
25
February, 2023
20
January, 2020
19
April, 2020
12
March, 2020
9
August, 2018
2
January, 2018
2
May, 2024
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
1
November, 2019
1
November, 2020
1
October, 2019
Available data
3926
bed bed3+
794
tsv
157
bigWig
108
txt
34
bed bed9+
24
csv
9
bigBed bed9
9
bigBed narrowPeak
5
bed bed9
4
bam
3
bed gappedPeak
3
xls
Organism
4818
Homo sapiens
Biosample type
1751
cell line
1428
primary cell
1349
tissue
334
in vitro differentiated cells
1
stem cell
Organ
601
epithelium
456
kidney
260
connective tissue
221
brain
195
musculature of body
168
pancreas
155
lung
144
intestine
136
bodily fluid
134
vasculature
129
blood
117
skin of body
109
limb
107
heart
102
embryo
96
blood vessel
92
large intestine
82
eye
73
extraembryonic component
70
liver
58
stomach
50
bone element
50
mammary gland
48
adipose tissue
48
prostate gland
45
lymph node
43
penis
39
small intestine
37
placenta
35
artery
32
ureter
30
adrenal gland
27
gonad
23
thymus
21
esophagus
21
spinal cord
19
uterus
18
spleen
16
testis
14
lymphatic vessel
13
lymphoid tissue
13
vein
10
mouth
10
ovary
10
thyroid gland
9
bronchus
9
nerve
8
bone marrow
7
breast
6
tongue
5
trachea
5
urinary bladder
5
vagina
4
skeleton
2
nose
2
pituitary gland
1
pericardium
Project
4520
AMP
281
KPMP
28
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
5483
hg19
GRCh38
hg18
annotation_type!
target gene predictions
variant allelic effects
assembly!
GRCh38
hg18
BIOSAMPLE
TYPE
4864 results
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Clear Filters
candidate regulatory elements
histone modifications
binding sites
gene expression
accessible chromatin
differential activity
chromatin state
eQTL
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
Fine-mapped variants
representative DNase hypersensitivity sites
cell line
A549
21
1
2
1
EndoC_BH1
1
1
8
7
3
breast cancer cell
11
9
MCF-7
9
2
3
1
H1-hESC
1
1
2
8
1
+ See 753 more…
primary cell
CD8-positive, alpha-beta T cell
7
30
3
3
1
monocyte
2
1
15
5
1
2
1
1
common myeloid progenitor, CD34-positive
27
B cell
14
2
3
epithelial cell of proximal tubule
2
1
16
+ See 359 more…
tissue
stomach
40
1
1
3
heart
37
1
1
3
2
kidney
29
2
1
7
1
1
brain
29
3
1
1
1
islet of Langerhans
1
2
11
2
3
10
2
2
2
+ See 226 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
1
1
1
1
adipocyte
4
1
1
1
4
4
neural progenitor cell
5
2
7
embryonic stem cell
1
1
6
5
cardiomyocytes
11
+ See 109 more…
stem cell
H1-hESC
1
See all biosamples
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