Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
70
candidate regulatory elements
target gene predictions
8
accessible chromatin
6
binding sites
5
histone modifications
3
chromatin state
2
gene expression
Date released
46
February, 2021
33
September, 2022
8
June, 2020
3
August, 2017
2
March, 2024
1
February, 2024
1
October, 2022
Available data
92
bed bed3+
2
tsv
Organism
94
Homo sapiens
Biosample type
70
tissue
22
cell line
2
in vitro differentiated cells
Organ
642
epithelium
472
kidney
278
connective tissue
238
brain
202
musculature of body
179
pancreas
156
lung
149
vasculature
147
intestine
136
bodily fluid
129
blood
118
skin of body
117
heart
117
limb
105
blood vessel
102
embryo
92
large intestine
84
eye
76
liver
73
extraembryonic component
60
stomach
53
adipose tissue
51
mammary gland
50
bone element
49
prostate gland
45
lymph node
43
penis
39
artery
39
small intestine
37
placenta
35
ureter
31
adrenal gland
27
gonad
23
esophagus
23
thymus
21
spinal cord
19
uterus
18
spleen
16
testis
14
lymphatic vessel
14
vein
lymphoid tissue
11
nerve
11
thyroid gland
10
bronchus
10
mouth
10
ovary
8
bone marrow
7
breast
6
tongue
5
trachea
5
urinary bladder
5
vagina
4
skeleton
2
nose
2
pituitary gland
1
pericardium
Project
94
AMP
Genome assembly (visualization)
129
hg19
GRCh38
annotation_type!
target gene predictions
assembly!
GRCh38
organ_slims!
lymphoid tissue
BIOSAMPLE
TYPE
94 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
binding sites
histone modifications
chromatin state
gene expression
tissue
large intestine
27
1
1
sigmoid colon
10
1
transverse colon
8
1
colonic mucosa
4
1
1
mucosa of rectum
4
1
+ See 6 more…
cell line
HT-29
2
1
1
1
SW480
2
1
1
1
RKO
1
1
1
1
HCT-116 cell
1
2
HCT116
2
+ See 3 more…
in vitro differentiated cells
olfactory neurosphere cell line
1
1
See all biosamples
Download