Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
845
candidate regulatory elements
target gene predictions
465
chromatin state
187
accessible chromatin
111
eQTL
105
gene expression
88
histone modifications
74
Fine-mapped variants
48
variant allelic effects
35
binding sites
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
Date released
826
September, 2022
581
February, 2021
75
March, 2020
61
January, 2020
61
June, 2020
59
May, 2020
55
January, 2022
48
February, 2020
43
August, 2021
27
March, 2024
26
February, 2023
26
February, 2024
19
August, 2017
17
November, 2022
10
November, 2019
9
May, 2019
8
April, 2019
6
March, 2023
5
October, 2019
3
May, 2021
3
September, 2018
2
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
Available data
1228
bed bed3+
440
bed bed9
207
tsv
112
bigWig
31
bigBed bed9
1
bam
Organism
1973
Homo sapiens
Biosample type
2062
primary cell
1975
tissue
1839
cell line
405
in vitro differentiated cells
1
stem cell
Organ
302
brain
242
kidney
236
musculature of body
189
limb
175
intestine
173
heart
lung
101
large intestine
99
pancreas
82
stomach
81
connective tissue
74
extraembryonic component
71
blood vessel
71
vasculature
70
adipose tissue
65
eye
59
small intestine
56
epithelium
51
ureter
46
liver
45
adrenal gland
45
placenta
37
artery
34
thymus
30
gonad
28
esophagus
28
spinal cord
27
embryo
26
spleen
22
nerve
22
skin of body
bone element
15
ovary
15
skeleton
15
testis
15
thyroid gland
14
lymphoid tissue
13
prostate gland
11
uterus
10
breast
9
mouth
8
tongue
8
vagina
7
urinary bladder
4
bodily fluid
3
blood
3
pituitary gland
2
mammary gland
2
penis
1
vein
Project
1970
AMP
5
ITG
Genome assembly (visualization)
1790
hg19
679
GRCh38
hg18
annotation_type!
target gene predictions
assembly!
hg18
organ_slims!
bone element
lung
BIOSAMPLE
TYPE
1975 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
accessible chromatin
eQTL
gene expression
histone modifications
Fine-mapped variants
variant allelic effects
binding sites
differential activity
variant to gene
pQTL
caQTL
sQTL
other
tissue
heart
37
21
5
3
1
2
1
kidney
29
16
10
1
7
2
1
1
stomach
40
19
3
1
1
1
brain
29
18
2
2
1
3
1
1
muscle of arm
33
16
1
1
+ See 240 more…
See all biosamples
Download