Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
31
candidate regulatory elements
target gene predictions
15
chromatin state
8
binding sites
7
histone modifications
6
accessible chromatin
2
gene expression
1
eQTL
1
variant allelic effects
Date released
31
February, 2021
30
September, 2022
6
June, 2020
2
March, 2024
1
February, 2024
1
January, 2022
Available data
53
bed bed3+
15
bed bed9
2
tsv
Organism
71
Homo sapiens
Biosample type
43
cell line
21
tissue
7
primary cell
Organ
827
epithelium
577
kidney
390
brain
380
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
133
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
74
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
71
AMP
Genome assembly (visualization)
68
hg19
16
GRCh38
annotation_type!
target gene predictions
assembly!
hg18
organ_slims!
vagina
BIOSAMPLE
TYPE
71 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
binding sites
histone modifications
accessible chromatin
gene expression
eQTL
variant allelic effects
cell line
22Rv1
4
2
1
1
PC-3
2
1
1
1
1
RWPE1
2
1
1
1
1
LNCAP
2
1
1
1
LNCaP clone FGC
3
2
+ See 5 more…
tissue
prostate gland
4
2
2
2
1
1
tongue
4
2
1
minor salivary gland
1
prostate
1
primary cell
epithelial cell of prostate
4
2
luminal epithelial cell of prostatic duct
1
See all biosamples
Download