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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
113
candidate regulatory elements
target gene predictions
59
chromatin state
10
accessible chromatin
8
histone modifications
6
binding sites
3
eQTL
3
gene expression
3
variant allelic effects
Date released
109
September, 2022
71
February, 2021
10
June, 2020
4
August, 2017
4
February, 2024
3
January, 2022
3
March, 2024
1
October, 2022
Available data
144
bed bed3+
55
bed bed9
3
tsv
Organism
205
Homo sapiens
Biosample type
175
tissue
26
cell line
4
primary cell
Organ
749
epithelium
574
kidney
390
brain
350
connective tissue
287
musculature of body
230
vasculature
227
lung
222
pancreas
205
intestine
200
heart
195
limb
176
blood vessel
161
bodily fluid
155
skin of body
152
blood
131
liver
129
embryo
127
large intestine
extraembryonic component
eye
84
stomach
76
adipose tissue
72
bone element
67
artery
65
mammary gland
63
prostate gland
59
small intestine
54
placenta
53
lymph node
53
penis
51
ureter
46
adrenal gland
38
gonad
34
spinal cord
34
thymus
33
esophagus
26
spleen
24
uterus
22
nerve
22
testis
19
vein
18
lymphoid tissue
16
lymphatic vessel
16
thyroid gland
15
mouth
15
ovary
15
skeleton
12
bronchus
10
breast
9
bone marrow
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
205
AMP
ENCODE
Genome assembly (visualization)
199
hg19
58
GRCh38
annotation_type!
target gene predictions
award.project!
ENCODE
organ_slims!
extraembryonic component
eye
BIOSAMPLE
TYPE
205 results
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Clear Filters
candidate regulatory elements
chromatin state
accessible chromatin
histone modifications
binding sites
eQTL
gene expression
variant allelic effects
tissue
small intestine
29
15
1
1
large intestine
27
13
1
1
sigmoid colon
10
5
1
transverse colon
8
4
1
1
Peyer's patch
7
3
1
+ See 15 more…
cell line
HT-29
2
1
1
1
1
SW480
2
1
1
1
1
RKO
1
1
1
1
HCT-116 cell
1
2
HCT116
2
1
+ See 3 more…
primary cell
enterocyte
3
intestinal epithelial cell
1
See all biosamples
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