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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
target gene predictions
10
accessible chromatin
6
binding sites
5
histone modifications
3
chromatin state
Date released
46
February, 2021
32
September, 2022
7
June, 2020
3
August, 2017
3
November, 2021
1
February, 2024
1
October, 2022
Available data
93
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
93
Homo sapiens
Biosample type
68
tissue
22
cell line
3
primary cell
Organ
418
epithelium
248
connective tissue
234
kidney
233
brain
201
musculature of body
158
lung
155
intestine
133
bodily fluid
129
vasculature
126
blood
126
limb
124
heart
121
skin of body
113
pancreas
96
blood vessel
94
embryo
93
large intestine
89
eye
80
liver
76
extraembryonic component
63
stomach
54
bone element
54
mammary gland
48
prostate gland
45
lymph node
43
penis
41
small intestine
39
placenta
38
artery
38
ureter
36
adrenal gland
35
adipose tissue
26
gonad
24
thymus
23
esophagus
20
spinal cord
18
spleen
18
uterus
15
testis
13
vein
12
lymphoid tissue
12
skeleton
11
nerve
11
thyroid gland
10
bronchus
10
lymphatic vessel
10
ovary
9
mouth
8
bone marrow
6
breast
5
tongue
5
trachea
4
urinary bladder
4
vagina
2
nose
1
pituitary gland
Project
90
AMP
3
ENCODE
Genome assembly (visualization)
93
hg19
3
GRCh38
annotation_type!
target gene predictions
award.project!
LungMap
files.file_type!
bigBed bed9
BIOSAMPLE
TYPE
93 results
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Clear Filters
candidate regulatory elements
accessible chromatin
binding sites
histone modifications
chromatin state
tissue
large intestine
27
1
1
sigmoid colon
10
1
transverse colon
8
1
colonic mucosa
4
1
1
mucosa of rectum
4
1
+ See 4 more…
cell line
HT-29
2
1
1
1
SW480
2
1
1
1
RKO
1
1
1
1
HCT-116 cell
1
2
HCT116
2
+ See 3 more…
primary cell
colon epithelial cell
3
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