Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
target gene predictions
36
chromatin state
7
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
65
September, 2022
46
February, 2021
7
June, 2020
3
August, 2017
November, 2021
2
January, 2022
2
March, 2024
1
February, 2024
1
October, 2022
Available data
90
bed bed3+
33
bed bed9
2
tsv
Organism
127
Homo sapiens
Biosample type
101
tissue
26
cell line
Organ
742
epithelium
574
kidney
390
brain
347
connective tissue
287
musculature of body
227
vasculature
224
lung
222
pancreas
205
intestine
200
heart
195
limb
174
blood vessel
161
bodily fluid
155
skin of body
152
blood
liver
129
embryo
127
large intestine
107
extraembryonic component
96
eye
84
stomach
76
adipose tissue
72
bone element
67
artery
65
mammary gland
63
prostate gland
59
small intestine
54
placenta
53
lymph node
53
penis
51
ureter
46
adrenal gland
38
gonad
34
spinal cord
34
thymus
33
esophagus
26
spleen
24
uterus
22
nerve
22
testis
19
vein
18
lymphoid tissue
16
thyroid gland
15
lymphatic vessel
15
mouth
15
ovary
15
skeleton
11
bronchus
10
breast
9
bone marrow
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
127
AMP
Genome assembly (visualization)
123
hg19
35
GRCh38
annotation_type!
target gene predictions
award.project!
LungMap
month_released!
November, 2021
organ_slims!
liver
BIOSAMPLE
TYPE
127 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
13
1
1
sigmoid colon
10
5
1
transverse colon
8
4
1
1
colonic mucosa
4
3
1
mucosa of rectum
4
3
+ See 7 more…
cell line
HT-29
2
1
1
1
1
SW480
2
1
1
1
1
RKO
1
1
1
1
HCT-116 cell
1
2
HCT116
2
1
+ See 3 more…
See all biosamples
Download