Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
59
candidate regulatory elements
target gene predictions
33
chromatin state
10
accessible chromatin
7
histone modifications
5
binding sites
1
eQTL
Date released
66
September, 2022
37
February, 2021
7
June, 2020
3
November, 2021
1
January, 2022
1
October, 2022
Available data
81
bed bed3+
33
bed bed9
3
bigWig
Organism
115
Homo sapiens
Biosample type
74
tissue
36
primary cell
3
in vitro differentiated cells
2
cell line
Organ
820
epithelium
577
kidney
390
brain
379
connective tissue
295
musculature of body
233
pancreas
232
vasculature
230
lung
216
intestine
206
heart
limb
177
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphoid tissue
17
lymphatic vessel
17
thyroid gland
16
ovary
15
mouth
15
skeleton
12
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
112
AMP
3
ENCODE
Genome assembly (visualization)
114
hg19
37
GRCh38
annotation_type!
target gene predictions
award.project!
LungMap
organ_slims!
limb
BIOSAMPLE
TYPE
115 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
accessible chromatin
histone modifications
binding sites
eQTL
tissue
placenta
26
14
1
2
1
1
chorionic villus
8
4
chorion membrane
3
3
1
umbilical cord
2
1
1
1
amnion
2
1
+ See 1 more…
primary cell
trophoblast cell
7
4
1
1
fibroblast of villous mesenchyme
2
1
1
1
2
tracheal epithelial cell
1
2
2
amnion mesenchymal stem cell
1
1
amniotic stem cell
1
1
+ See 6 more…
in vitro differentiated cells
trophoblast cell
2
1
cell line
HTR-8/Svneo
1
1
See all biosamples
Download