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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
257
candidate regulatory elements
161
gene expression
target gene predictions
139
chromatin state
125
accessible chromatin
55
binding sites
41
variant allelic effects
35
histone modifications
28
differential activity
5
eQTL
2
caQTL
Date released
280
February, 2021
272
September, 2022
76
February, 2024
36
March, 2023
33
June, 2020
24
May, 2021
23
August, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
11
October, 2022
9
February, 2020
6
August, 2018
5
October, 2019
4
August, 2017
4
March, 2020
3
March, 2024
2
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
515
bed bed3+
170
tsv
135
bed bed9
78
bigWig
78
txt
11
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
848
Homo sapiens
Biosample type
474
primary cell
238
tissue
111
cell line
25
in vitro differentiated cells
Organ
575
epithelium
434
kidney
390
brain
325
connective tissue
287
musculature of body
224
lung
210
pancreas
205
intestine
200
heart
195
limb
192
vasculature
161
bodily fluid
155
skin of body
154
blood vessel
152
blood
131
liver
129
embryo
127
large intestine
107
extraembryonic component
96
eye
84
stomach
76
adipose tissue
71
bone element
65
mammary gland
63
prostate gland
62
artery
59
small intestine
54
placenta
53
lymph node
53
penis
51
ureter
46
adrenal gland
38
gonad
34
spinal cord
34
thymus
33
esophagus
26
spleen
24
uterus
22
nerve
22
testis
19
vein
18
lymphoid tissue
16
thyroid gland
15
mouth
15
ovary
15
skeleton
11
bronchus
10
breast
10
lymphatic vessel
8
bone marrow
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
848
AMP
155
KPMP
79
ENCODE
10
T1D
8
LungMap
2
community
Genome assembly (visualization)
653
hg19
194
GRCh38
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
848 results
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Clear Filters
candidate regulatory elements
gene expression
chromatin state
accessible chromatin
binding sites
variant allelic effects
histone modifications
differential activity
eQTL
caQTL
primary cell
hepatocyte
1
13
1
7
1
2
4
epithelial cell of proximal tubule
2
16
1
1
1
1
endothelial cell
9
4
2
2
1
1
2
glomerular endothelial cell
2
14
1
2
1
endothelial cell of umbilical vein
6
5
2
2
1
+ See 86 more…
tissue
lung
33
1
16
1
placenta
26
14
1
1
2
1
left lung
26
13
right lung
22
11
1
pigmented layer of retina
20
+ See 20 more…
cell line
A549
21
18
1
2
1
EndoC_BH1
8
8
1
1
IMR-90
2
1
1
2
1
PC-9
2
1
1
1
1
WI38
5
1
+ See 15 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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