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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 1709candidate regulatory elements
  • target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 817binding sites
  • 643accessible chromatin
  • 518gene expression
  • 184eQTL
  • 140variant allelic effects
  • 84Fine-mapped variants
  • 53differential activity
  • 11caQTL
  • 5hQTL
  • 5sQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2588February, 2021
  • 1677September, 2022
  • 289June, 2020
  • 250May, 2021
  • 203February, 2024
  • 137May, 2020
  • 123August, 2021
  • 105January, 2022
  • 99October, 2022
  • 88January, 2020
  • 84March, 2020
  • 64February, 2020
  • 61March, 2023
  • 49May, 2022
  • 44November, 2022
  • 38March, 2025
  • 38May, 2024
  • 35August, 2017
  • 31February, 2023
  • 30March, 2024
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 4453bed bed3+
  • 3293tsv
  • 869bed bed9
  • 274bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 24csv
  • 13bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 8692Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 1666EpiMap
  • 966ENCODE
  • 457DGA
  • 345T1D
  • 202BLUEPRINT
  • 190AMP
  • 151GTEx
  • 111T2D
  • 109 T2DKP
  • 101eQTLCatalogue
  • 91CMDGA
  • 67HPAP
  • 67T2DKP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4800tissue
  • 1944cell line
  • 1588primary cell
  • 405in vitro differentiated cells
  • 1stem cell
Organ
  • 2839vasculature
  • 2802bodily fluid
  • 2798blood vessel
  • 2793blood
  • 2654vein
  • 584epithelium
  • 434kidney
  • 391brain
  • 343connective tissue
  • 292musculature of body
  • 224lung
  • 210pancreas
  • 205intestine
  • 202heart
  • 195limb
  • 155skin of body
  • 138liver
  • 129embryo
  • 127large intestine
  • 107extraembryonic component
  • 96eye
  • 86adipose tissue
  • 84stomach
  • 71bone element
  • 66artery
  • 65mammary gland
  • 63prostate gland
  • 59small intestine
  • 54placenta
  • 53lymph node
  • 53penis
  • 51ureter
  • 46adrenal gland
  • 38gonad
  • 34spinal cord
  • 34thymus
  • 33esophagus
  • 26spleen
  • 24uterus
  • 22nerve
  • 22testis
  • 18lymphoid tissue
  • 16thyroid gland
  • 15mouth
  • 15ovary
  • 15skeleton
  • 13lymphatic vessel
  • 11bronchus
  • 10breast
  • 8bone marrow
  • 8tongue
  • 8vagina
  • 7urinary bladder
  • 5trachea
  • 3nose
  • 3pituitary gland
  • 1pericardium
Project
  • 8739AMP
  • 281KPMP
  • 222ENCODE
  • 32T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5369hg19
  • 1399GRCh38
  • 4hg18
annotation_type!
  • target gene predictions
BIOSAMPLE
TYPE

8739 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
histone modifications
chromatin state
binding sites
accessible chromatin
gene expression
eQTL
variant allelic effects
Fine-mapped variants
differential activity
caQTL
hQTL
sQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart371211532
kidney29216110711
stomach40119311
brain2931812121
cell line
A5492111821
EndoC_BH1118811
MCF-792531
breast cancer cell119
K56271721
primary cell
monocyte86117154211
CD8-positive, alpha-beta T cell730123
common myeloid progenitor, CD34-positive2713
hepatocyte24117132
B cell17822
in vitro differentiated cells
neural progenitor cell5154107
hematopoietic multipotent progenitor cell19110111
adipocyte416141
embryonic stem cell1516
cardiomyocytes11
stem cell
H1-hESC1
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