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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
accessible chromatin
23
candidate regulatory elements
21
gene expression
target gene predictions
16
chromatin state
14
histone modifications
13
binding sites
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
30
September, 2022
26
February, 2024
25
February, 2021
10
August, 2021
7
March, 2020
5
June, 2020
4
March, 2023
4
November, 2021
3
August, 2017
3
January, 2020
3
May, 2020
2
February, 2020
2
May, 2022
2
May, 2024
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
80
bed bed3+
25
tsv
23
bigWig
13
bed bed9
1
bam
1
bigBed bed9
Organism
131
Homo sapiens
Biosample type
61
primary cell
47
tissue
23
cell line
in vitro differentiated cells
Organ
802
epithelium
576
kidney
388
brain
351
connective tissue
294
musculature of body
236
vasculature
233
lung
220
pancreas
intestine
207
heart
195
limb
179
blood vessel
161
bodily fluid
152
blood
151
skin of body
131
liver
130
large intestine
108
embryo
107
extraembryonic component
94
eye
89
stomach
76
adipose tissue
72
bone element
67
artery
65
mammary gland
63
prostate gland
61
small intestine
56
placenta
53
lymph node
52
adrenal gland
51
ureter
47
penis
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
lymphatic vessel
19
vein
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
breast
9
bone marrow
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
pituitary gland
1
pericardium
Project
127
AMP
4
ENCODE
Genome assembly (visualization)
102
hg19
60
GRCh38
2
hg18
annotation_type!
target gene predictions
biosample_type!
in vitro differentiated cells
month_released!
January, 2021
organ_slims!
intestine
BIOSAMPLE
TYPE
131 results
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Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
chromatin state
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
8
2
13
1
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
2
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
4
13
1
9
2
1
7
1
1
right lobe of liver
2
1
1
1
3
cell line
HepG2
2
2
2
5
3
HuH-7
1
1
1
1
1
HuH-7.5
1
1
hepatic stellate cell
1
1
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