Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
target gene predictions
26
candidate regulatory elements
16
accessible chromatin
13
chromatin state
9
binding sites
5
variant allelic effects
4
histone modifications
1
gene expression
Date released
26
September, 2022
21
February, 2021
9
June, 2020
6
January, 2020
5
May, 2020
5
October, 2022
1
February, 2024
1
January, 2022
Available data
60
bed bed3+
13
bed bed9
7
bigWig
1
tsv
Organism
74
Homo sapiens
Biosample type
tissue
52
cell line
20
primary cell
2
in vitro differentiated cells
Organ
epithelium
335
kidney
299
connective tissue
164
vasculature
157
bodily fluid
149
blood
138
skin of body
134
pancreas
108
blood vessel
104
embryo
96
lung
88
brain
88
liver
66
mammary gland
59
musculature of body
54
bone element
53
lymph node
51
penis
50
prostate gland
41
intestine
extraembryonic component
35
eye
33
heart
30
artery
29
large intestine
18
lymphatic vessel
18
vein
14
uterus
13
bronchus
11
placenta
10
bone marrow
9
gonad
7
adrenal gland
7
esophagus
7
stomach
7
testis
6
limb
6
mouth
6
spinal cord
5
trachea
4
adipose tissue
4
lymphoid tissue
3
nose
2
small intestine
2
thyroid gland
1
ovary
1
pericardium
1
thymus
Project
74
AMP
Genome assembly (visualization)
73
hg19
20
GRCh38
annotation_type!
target gene predictions
biosample_type!
tissue
organ_slims!
epithelium
extraembryonic component
BIOSAMPLE
TYPE
74 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
chromatin state
binding sites
variant allelic effects
histone modifications
gene expression
cell line
SK-N-DZ
4
1
2
1
SK-N-MC
2
1
1
2
1
SK-N-SH
4
2
1
BE(2)-C
1
1
1
2
1
Daoy
2
1
1
1
+ See 7 more…
primary cell
cardiac fibroblast
3
2
astrocyte of the cerebellum
2
1
1
1
astrocyte of the hippocampus
2
1
1
1
brain pericyte
1
1
1
Glioblastoma
1
+ See 1 more…
in vitro differentiated cells
hippocampal neuron
1
1
See all biosamples
Download