Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
484
accessible chromatin
478
gene expression
target gene predictions
363
candidate regulatory elements
210
histone modifications
152
differential activity
100
binding sites
80
variant allelic effects
46
eQTL
33
chromatin state
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
452
February, 2021
281
September, 2023
222
November, 2021
210
May, 2021
164
September, 2022
145
February, 2024
70
May, 2020
55
March, 2023
53
June, 2020
42
August, 2021
41
May, 2024
40
May, 2022
36
January, 2022
31
October, 2022
28
January, 2021
21
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
6
August, 2017
5
October, 2019
4
February, 2023
4
March, 2020
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1257
bed bed3+
591
tsv
407
bigWig
bed bed9
108
txt
27
bed bed9+
13
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1924
Homo sapiens
Biosample type
1969
primary cell
1740
cell line
1637
tissue
365
in vitro differentiated cells
1
stem cell
Organ
671
epithelium
291
kidney
215
connective tissue
138
vasculature
102
pancreas
91
blood vessel
59
liver
57
skin of body
42
musculature of body
28
mammary gland
28
penis
27
brain
24
artery
23
extraembryonic component
22
heart
22
lung
17
eye
15
intestine
15
lymphatic vessel
13
embryo
12
vein
11
bronchus
10
bone element
9
blood
9
bodily fluid
9
bone marrow
8
placenta
7
adrenal gland
7
stomach
6
esophagus
prostate gland
5
trachea
4
uterus
3
gonad
3
large intestine
2
mouth
2
small intestine
2
spinal cord
2
thyroid gland
1
adipose tissue
1
ovary
1
pericardium
1
testis
1
thymus
Project
1414
AMP
281
KPMP
222
ENCODE
31
T1D
19
LungMap
2
community
Genome assembly (visualization)
1301
hg19
465
GRCh38
annotation_type!
target gene predictions
files.file_type!
bed bed9
organ_slims!
prostate gland
BIOSAMPLE
TYPE
1969 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
histone modifications
differential activity
binding sites
variant allelic effects
eQTL
chromatin state
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
15
86
1
4
2
1
1
CD8-positive, alpha-beta T cell
4
3
7
30
1
endothelial cell
15
9
3
1
2
2
1
2
hepatocyte
8
13
2
4
1
2
fibroblast
16
3
1
6
2
+ See 440 more…
See all biosamples
Download