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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • target gene predictions
  • 977histone modifications
  • 913accessible chromatin
  • 817binding sites
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 75chromatin state
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2588February, 2021
  • 844September, 2022
  • 289June, 2020
  • 281September, 2023
  • 245May, 2021
  • 222November, 2021
  • 204February, 2024
  • 134May, 2020
  • 128August, 2021
  • 105January, 2022
  • 101October, 2022
  • 84March, 2020
  • 82January, 2020
  • 70March, 2023
  • 64February, 2020
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 28January, 2021
  • 19April, 2020
  • 13November, 2019
  • 9August, 2018
  • 9October, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1April, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 4727bed bed3+
  • 3576tsv
  • bed bed9
  • 543bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 13bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 8394Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 966ENCODE
  • 833EpiMap
  • 453DGA
  • 417AMP
  • 376T1D
  • 293T2DKP
  • 281KPMP
  • 202BLUEPRINT
  • 151GTEx
  • 123 T2DKP
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4319tissue
  • 1981primary cell
  • 1774cell line
  • 365in vitro differentiated cells
  • 1stem cell
Organ
  • 2850vasculature
  • 2796blood vessel
  • 2777bodily fluid
  • 2770blood
  • 2650vein
  • 786epithelium
  • 500kidney
  • 361connective tissue
  • 325brain
  • 229musculature of body
  • 220pancreas
  • 163lung
  • 162heart
  • 161intestine
  • 145limb
  • 128liver
  • 126skin of body
  • 104embryo
  • 97large intestine
  • 91eye
  • 78adipose tissue
  • 77extraembryonic component
  • 66stomach
  • 63artery
  • 59bone element
  • 54mammary gland
  • 50prostate gland
  • 45lymph node
  • 43penis
  • 42small intestine
  • 40placenta
  • 38adrenal gland
  • 38ureter
  • 31gonad
  • 28esophagus
  • 26spinal cord
  • 24thymus
  • 21uterus
  • 20spleen
  • 19lymphatic vessel
  • 18nerve
  • 18testis
  • 13lymphoid tissue
  • 13thyroid gland
  • 12ovary
  • 12skeleton
  • 11bronchus
  • 11mouth
  • 9bone marrow
  • 8breast
  • 6tongue
  • 6vagina
  • 5trachea
  • 5urinary bladder
  • 3pituitary gland
  • 2nose
  • 1pericardium
Project
  • 7870AMP
  • 281KPMP
  • 222ENCODE
  • 32T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4776hg19
  • 760GRCh38
  • 4hg18
annotation_type!
  • target gene predictions
files.file_type!
  • bed bed9
BIOSAMPLE
TYPE

8442 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
chromatin state
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
kidney292101711
heart3715132
stomach401311
islet of Langerhans162111312322
primary cell
monocyte86181154121
CD8-positive, alpha-beta T cell730431
endothelial cell311529122
macrophage31229311
hepatocyte2481132
cell line
A54921112
EndoC_BH1181831
breast cancer cell119
MCF-79213
H1-hESC11128
in vitro differentiated cells
neural progenitor cell515107
hematopoietic multipotent progenitor cell191111
adipocyte414114
cardiomyocytes11
extended pluripotent stem (EPS) cells9
stem cell
H1-hESC1
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