Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
119
candidate regulatory elements
target gene predictions
58
chromatin state
25
accessible chromatin
12
Fine-mapped variants
8
binding sites
8
eQTL
8
gene expression
8
variant allelic effects
4
histone modifications
Date released
116
September, 2022
77
February, 2021
12
March, 2020
10
June, 2020
8
January, 2020
8
May, 2020
7
February, 2020
4
January, 2022
3
March, 2024
2
November, 2019
2
October, 2022
1
November, 2021
Available data
164
bed bed3+
62
bed bed9
24
tsv
15
bigWig
bigBed bed9
Organism
250
Homo sapiens
Biosample type
224
tissue
19
cell line
7
primary cell
Organ
845
epithelium
575
kidney
396
connective tissue
384
brain
292
musculature of body
233
lung
233
vasculature
231
pancreas
216
intestine
200
heart
191
limb
171
blood vessel
161
bodily fluid
160
skin of body
152
blood
138
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
75
adipose tissue
73
bone element
68
mammary gland
65
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
24
lymphatic vessel
22
testis
21
nerve
18
lymphoid tissue
17
thyroid gland
17
vein
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
249
AMP
1
ENCODE
Genome assembly (visualization)
238
hg19
93
GRCh38
annotation_type!
target gene predictions
files.file_type!
bigBed bed9
BIOSAMPLE
TYPE
250 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
accessible chromatin
Fine-mapped variants
binding sites
eQTL
gene expression
variant allelic effects
histone modifications
tissue
muscle of arm
33
16
1
1
muscle of leg
27
13
2
spinal cord
14
7
1
1
tibial nerve
6
3
3
3
2
2
2
tibial artery
3
2
3
3
2
1
2
+ See 24 more…
cell line
HeLa-S3
5
3
1
GM23248
2
1
1
1
1
spinal cord
1
2
Ishikawa
1
primary cell
Ishikawa
1
1
1
astrocyte of the spinal cord
2
1
uterine smooth muscle cell
1
See all biosamples
Download