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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • target gene predictions
  • 977histone modifications
  • 942chromatin state
  • 817binding sites
  • 680gene expression
  • 385accessible chromatin
  • 189eQTL
  • 172differential activity
  • 137variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2576February, 2021
  • 1674September, 2022
  • 289June, 2020
  • 281September, 2023
  • 237May, 2021
  • 166February, 2024
  • 108August, 2021
  • 101January, 2022
  • 101October, 2022
  • 84March, 2020
  • 84May, 2020
  • 70March, 2023
  • 64February, 2020
  • 42May, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 33November, 2022
  • 30March, 2024
  • 23January, 2020
  • 13February, 2023
  • 9August, 2018
  • 8April, 2019
  • 7May, 2019
  • 5October, 2019
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 4727bed bed3+
  • 3576tsv
  • 869bed bed9
  • bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 13bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 8764Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 1666EpiMap
  • 966ENCODE
  • 401DGA
  • 335T1D
  • 281KPMP
  • 189BLUEPRINT
  • 180AMP
  • 151GTEx
  • 104 T2DKP
  • 104T2D
  • 101eQTLCatalogue
  • 69CMDGA
  • 55HPAP
  • 43STARNET
  • 35T2DKP
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4685tissue
  • 1949cell line
  • 1738primary cell
  • 393in vitro differentiated cells
  • 1stem cell
Organ
  • 2851vasculature
  • 2802bodily fluid
  • 2800blood vessel
  • 2793blood
  • 2653vein
  • 663epithelium
  • 541kidney
  • 370brain
  • 347connective tissue
  • 284musculature of body
  • 224lung
  • 205intestine
  • 186heart
  • 181limb
  • 179pancreas
  • 155skin of body
  • 129embryo
  • 127large intestine
  • 119liver
  • 107extraembryonic component
  • 84stomach
  • 81adipose tissue
  • 65mammary gland
  • 64eye
  • 63bone element
  • 63prostate gland
  • 62artery
  • 59small intestine
  • 54placenta
  • 53lymph node
  • 53penis
  • 48ureter
  • 46adrenal gland
  • 38gonad
  • 34spinal cord
  • 34thymus
  • 33esophagus
  • 25spleen
  • 24uterus
  • 22testis
  • 20nerve
  • 18lymphatic vessel
  • 18lymphoid tissue
  • 16thyroid gland
  • 15mouth
  • 15ovary
  • 11bronchus
  • 10breast
  • 8bone marrow
  • 8tongue
  • 8vagina
  • 7skeleton
  • 7urinary bladder
  • 5trachea
  • 3nose
  • 3pituitary gland
  • 1pericardium
Project
  • 8465AMP
  • 281KPMP
  • 13community
  • 5ITG
  • 4T1D
Genome assembly (visualization)
  • 5111hg19
  • 1242GRCh38
  • 4hg18
annotation_type!
  • target gene predictions
files.file_type!
  • bigWig
BIOSAMPLE
TYPE

8768 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
histone modifications
chromatin state
binding sites
gene expression
accessible chromatin
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart371211322
stomach40119131
kidney2921517111
brain2931811121
cell line
A5492111821
EndoC_BH1118731
MCF-792531
breast cancer cell119
K56271721
primary cell
monocyte8611524121
CD8-positive, alpha-beta T cell73013
common myeloid progenitor, CD34-positive2713
B cell1782
CD4-positive, alpha-beta memory T cell149
in vitro differentiated cells
neural progenitor cell5154710
hematopoietic multipotent progenitor cell19110111
adipocyte416113
embryonic stem cell1516
cardiomyocytes11
stem cell
H1-hESC1
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