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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 1621candidate regulatory elements
  • target gene predictions
  • 952histone modifications
  • 896chromatin state
  • 825accessible chromatin
  • 786binding sites
  • 638gene expression
  • 164eQTL
  • 156differential activity
  • 125variant allelic effects
  • 76Fine-mapped variants
  • 11caQTL
  • 5hQTL
  • 5sQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2479February, 2021
  • 1597September, 2022
  • 269June, 2020
  • 266September, 2023
  • 247May, 2021
  • 190November, 2021
  • 186February, 2024
  • 128May, 2020
  • 117August, 2021
  • 99January, 2022
  • 89October, 2022
  • 78January, 2020
  • 78March, 2020
  • 63March, 2023
  • 55February, 2020
  • 46May, 2022
  • 37November, 2022
  • 31February, 2023
  • 30March, 2024
  • 30May, 2024
  • 28August, 2017
  • 28March, 2025
  • 27January, 2021
  • 16April, 2020
  • 14November, 2019
  • 12October, 2019
  • 9May, 2019
  • 8April, 2019
  • 8August, 2018
  • 1August, 2020
  • 1August, 2022
  • 1January, 2018
  • 1July, 2020
  • 1September, 2018
Available data
  • 4458bed bed3+
  • 3501tsv
  • 828bed bed9
  • 488bigWig
  • 101txt
  • 38bigBed bed9
  • 34bed bed9+
  • 24csv
  • 12bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 8861Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1783ChIP-Atlas
  • 1586EpiMap
  • 906ENCODE
  • 404DGA
  • 370AMP
  • 369T1D
  • 266KPMP
  • 245T2DKP
  • 202BLUEPRINT
  • 141GTEx
  • 104T2D
  • 95eQTLCatalogue
  • 94 T2DKP
  • 90CMDGA
  • 58HPAP
  • 31STARNET
  • 20FNIH_projects-heart
  • 12ROADMAP
  • 10FNIH_projects-liver
Biosample type
  • 4712tissue
  • 1925cell line
  • 1902primary cell
  • 367in vitro differentiated cells
  • 1stem cell
Organ
  • 2882vasculature
  • 2823blood vessel
  • 2802bodily fluid
  • 2793blood
  • 2654vein
  • 836epithelium
  • 577kidney
  • connective tissue
  • 391brain
  • 300musculature of body
  • 233lung
  • 233pancreas
  • 216intestine
  • 208heart
  • 195limb
  • 160skin of body
  • 142liver
  • 131embryo
  • 130large intestine
  • 110extraembryonic component
  • 100eye
  • 89stomach
  • 86adipose tissue
  • 73bone element
  • 71artery
  • 68mammary gland
  • 63prostate gland
  • 61small intestine
  • 56placenta
  • 53lymph node
  • 53penis
  • 52adrenal gland
  • 51ureter
  • 39gonad
  • 35esophagus
  • 35thymus
  • 34spinal cord
  • 26spleen
  • 25uterus
  • 22nerve
  • 22testis
  • 21lymphatic vessel
  • 18lymphoid tissue
  • 17thyroid gland
  • 16ovary
  • 15mouth
  • 15skeleton
  • 13bronchus
  • 10bone marrow
  • 10breast
  • 8tongue
  • 8vagina
  • 7urinary bladder
  • 5trachea
  • 3nose
  • 3pituitary gland
  • 1pericardium
Project
  • 8396AMP
  • 266KPMP
  • 190ENCODE
  • 31T1D
  • 16LungMap
  • 9community
  • 1ITG
Genome assembly (visualization)
  • 5328hg19
  • 1512GRCh38
  • 2hg18
annotation_type!
  • target gene predictions
organ_slims!
  • connective tissue
BIOSAMPLE
TYPE

8909 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
histone modifications
chromatin state
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart371215132
kidney29216101711
stomach40119311
brain2931821121
cell line
A5492111812
EndoC_BH1181831
MCF-792513
breast cancer cell119
K56271712
primary cell
monocyte86181154211
CD8-positive, alpha-beta T cell730143
common myeloid progenitor, CD34-positive2713
endothelial cell311529122
B cell17862
in vitro differentiated cells
neural progenitor cell5154107
hematopoietic multipotent progenitor cell19110111
embryonic stem cell1561
cardiomyocytes11
extended pluripotent stem (EPS) cells9
stem cell
H1-hESC1
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