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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1550candidate regulatory elements
  • target gene predictions
  • 971histone modifications
  • 867chromatin state
  • 863accessible chromatin
  • 810binding sites
  • 487gene expression
  • 185eQTL
  • 125variant allelic effects
  • 116differential activity
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2400February, 2021
  • 1527September, 2022
  • 274June, 2020
  • 250May, 2021
  • 219November, 2021
  • 203February, 2024
  • 141September, 2023
  • 118May, 2020
  • 104January, 2022
  • 100August, 2021
  • 99October, 2022
  • 81March, 2020
  • 74January, 2020
  • 70March, 2023
  • 55February, 2020
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 28January, 2021
  • 28March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 8May, 2019
  • 7April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 4491bed bed3+
  • 3325tsv
  • 792bed bed9
  • 507bigWig
  • 38bigBed bed9
  • 34bed bed9+
  • 26csv
  • 21txt
  • 13bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 8686Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1822ChIP-Atlas
  • 1516EpiMap
  • 875ENCODE
  • 415AMP
  • 375T1D
  • 312DGA
  • 291T2DKP
  • 202BLUEPRINT
  • 149GTEx
  • 141KPMP
  • 123 T2DKP
  • 110T2D
  • 100CMDGA
  • 100eQTLCatalogue
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4563tissue
  • 1919cell line
  • 1845primary cell
  • 404in vitro differentiated cells
  • 1stem cell
Organ
  • 2882vasculature
  • 2823blood vessel
  • 2802bodily fluid
  • 2793blood
  • 2654vein
  • 836epithelium
  • kidney
  • 402connective tissue
  • 391brain
  • 300musculature of body
  • 233lung
  • 233pancreas
  • 216intestine
  • 208heart
  • 195limb
  • 160skin of body
  • 142liver
  • 131embryo
  • 130large intestine
  • 110extraembryonic component
  • 100eye
  • 89stomach
  • 86adipose tissue
  • 73bone element
  • 71artery
  • 68mammary gland
  • 63prostate gland
  • 61small intestine
  • 56placenta
  • 53lymph node
  • 53penis
  • 52adrenal gland
  • 51ureter
  • 39gonad
  • 35esophagus
  • 35thymus
  • 34spinal cord
  • 26spleen
  • 25uterus
  • 22nerve
  • 22testis
  • 21lymphatic vessel
  • 18lymphoid tissue
  • 17thyroid gland
  • 16ovary
  • 15mouth
  • 15skeleton
  • 13bronchus
  • 10bone marrow
  • 10breast
  • 8tongue
  • 8vagina
  • 7urinary bladder
  • 5trachea
  • 3nose
  • 3pituitary gland
  • 1pericardium
Project
  • 8305AMP
  • 219ENCODE
  • 141KPMP
  • 32T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5333hg19
  • 1519GRCh38
  • 4hg18
annotation_type!
  • target gene predictions
organ_slims!
  • kidney
BIOSAMPLE
TYPE

8734 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
histone modifications
chromatin state
accessible chromatin
binding sites
gene expression
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart371215132
stomach40119311
brain2931821121
lung331611
cell line
A5492111812
EndoC_BH1181813
MCF-792513
breast cancer cell119
K56271712
primary cell
monocyte86181154121
CD8-positive, alpha-beta T cell730143
common myeloid progenitor, CD34-positive2713
endothelial cell311529122
B cell17862
in vitro differentiated cells
neural progenitor cell5154107
hematopoietic multipotent progenitor cell19110111
adipocyte416411
embryonic stem cell1561
cardiomyocytes11
stem cell
H1-hESC1
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