Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
target gene predictions
68
candidate regulatory elements
53
binding sites
40
chromatin state
30
histone modifications
27
accessible chromatin
5
gene expression
2
eQTL
Date released
106
February, 2021
74
September, 2022
20
October, 2022
17
June, 2020
2
August, 2017
2
August, 2021
1
January, 2021
1
March, 2024
1
May, 2022
1
November, 2021
Available data
180
bed bed3+
37
bed bed9
10
bigWig
5
tsv
1
bed bed9+
Organism
225
Homo sapiens
Biosample type
183
cell line
22
tissue
20
primary cell
Organ
827
epithelium
577
kidney
390
brain
382
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
223
AMP
1
ENCODE
1
T1D
Genome assembly (visualization)
220
hg19
46
GRCh38
annotation_type!
target gene predictions
organ_slims!
adipose tissue
BIOSAMPLE
TYPE
225 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
binding sites
chromatin state
histone modifications
accessible chromatin
gene expression
eQTL
cell line
K562
7
2
7
1
1
GM12878
2
2
2
1
1
GM06990
2
2
1
1
1
HL-60
2
2
1
1
1
CMK
2
1
1
1
1
+ See 34 more…
tissue
bone tissue
4
femur
2
1
arm bone
1
1
blood
2
leg bone
1
1
+ See 9 more…
primary cell
peripheral blood mononuclear cell
4
1
1
mononuclear cell of bone marrow
2
1
peripheral blood stem cell
1
1
1
stromal cell of bone marrow
2
1
megakaryocyte
2
+ See 3 more…
See all biosamples
Download