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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
231
candidate regulatory elements
207
gene expression
target gene predictions
119
chromatin state
77
accessible chromatin
61
binding sites
56
differential activity
37
histone modifications
16
variant allelic effects
6
eQTL
1
pQTL
Date released
298
February, 2021
228
September, 2022
140
September, 2023
32
June, 2020
31
August, 2021
22
October, 2022
19
May, 2020
14
January, 2020
9
February, 2020
4
November, 2021
3
March, 2020
3
March, 2024
2
August, 2017
1
April, 2019
1
February, 2024
1
January, 2021
1
January, 2022
1
May, 2019
1
May, 2022
Available data
421
bed bed3+
256
tsv
116
bed bed9
87
txt
46
bigWig
2
bigBed bed9
1
bed bed9+
Organism
811
Homo sapiens
Biosample type
320
primary cell
265
tissue
225
cell line
1
in vitro differentiated cells
Organ
837
epithelium
577
kidney
390
brain
390
connective tissue
295
musculature of body
238
vasculature
233
lung
233
pancreas
216
intestine
208
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
137
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
21
lymphatic vessel
19
vein
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
666
AMP
140
KPMP
4
ENCODE
1
T1D
Genome assembly (visualization)
541
hg19
153
GRCh38
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
811 results
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Clear Filters
candidate regulatory elements
gene expression
chromatin state
accessible chromatin
binding sites
differential activity
histone modifications
variant allelic effects
eQTL
pQTL
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
glomerular endothelial cell
2
14
1
2
1
glomerular visceral epithelial cell
2
5
1
2
kidney tubule cell
3
1
2
2
kidney glomerular epithelial cell
2
1
1
2
1
+ See 71 more…
tissue
kidney
29
7
16
10
1
2
1
1
right kidney
20
10
1
1
renal cortex interstitium
20
9
1
1
renal pelvis
19
9
2
1
left kidney
18
9
+ See 30 more…
cell line
K562
7
7
1
2
1
GM12878
2
2
1
2
1
HEK293
3
1
1
2
1
GM06990
2
1
1
2
1
HL-60
2
1
1
2
1
+ See 49 more…
in vitro differentiated cells
renal cell carcinoma
1
See all biosamples
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