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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
142
candidate regulatory elements
target gene predictions
111
accessible chromatin
91
chromatin state
70
gene expression
55
histone modifications
44
eQTL
41
Fine-mapped variants
35
differential activity
28
variant allelic effects
23
binding sites
2
sQTL
2
variant to gene
Date released
154
September, 2022
144
February, 2021
47
March, 2023
42
March, 2020
32
January, 2020
26
February, 2024
26
June, 2020
26
May, 2021
25
May, 2020
22
January, 2022
20
February, 2020
13
November, 2021
10
January, 2021
9
August, 2017
8
August, 2021
7
August, 2018
6
October, 2019
6
October, 2022
5
September, 2023
4
May, 2019
3
May, 2024
3
November, 2019
1
April, 2019
1
April, 2020
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
362
bed bed3+
148
tsv
81
bed bed9
78
bigWig
11
bigBed narrowPeak
8
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
643
Homo sapiens
Biosample type
401
tissue
150
primary cell
86
cell line
7
in vitro differentiated cells
Organ
837
epithelium
577
kidney
390
brain
390
connective tissue
295
musculature of body
238
vasculature
233
lung
233
pancreas
216
intestine
208
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
137
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
21
lymphatic vessel
19
vein
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
613
AMP
13
ENCODE
10
T1D
5
KPMP
2
community
1
LungMap
Genome assembly (visualization)
505
hg19
213
GRCh38
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
644 results
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Clear Filters
candidate regulatory elements
accessible chromatin
chromatin state
gene expression
histone modifications
eQTL
Fine-mapped variants
differential activity
variant allelic effects
binding sites
sQTL
variant to gene
tissue
brain
29
2
18
1
3
2
1
1
islet of Langerhans
6
3
11
1
13
2
1
2
2
2
body of pancreas
8
4
2
1
3
1
caudate nucleus
5
2
4
1
1
2
3
1
pancreas
5
5
3
1
1
1
1
+ See 67 more…
primary cell
pancreatic ductal cell
6
3
2
3
1
1
pancreatic beta cell
8
3
3
1
pancreatic alpha cell
7
3
3
1
pancreatic acinar cell
6
3
3
1
pancreatic delta cell
5
3
3
1
+ See 23 more…
cell line
EndoC_BH1
8
8
3
1
SK-N-DZ
4
1
2
1
SK-N-MC
2
1
1
1
2
SK-N-SH
4
2
1
BE(2)-C
1
1
1
1
2
+ See 15 more…
in vitro differentiated cells
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
hippocampal neuron
1
1
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