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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
269
gene expression
230
accessible chromatin
170
candidate regulatory elements
target gene predictions
97
differential activity
96
chromatin state
52
variant allelic effects
48
binding sites
31
histone modifications
13
eQTL
9
Fine-mapped variants
5
caQTL
Date released
239
February, 2021
174
September, 2022
165
September, 2023
80
November, 2021
79
February, 2024
38
March, 2023
29
June, 2020
25
January, 2020
25
May, 2020
24
August, 2021
24
May, 2021
16
February, 2023
15
November, 2022
13
February, 2020
13
March, 2020
10
January, 2021
8
October, 2022
7
April, 2020
7
January, 2022
7
October, 2019
6
August, 2018
4
August, 2017
4
March, 2024
4
November, 2019
2
May, 2022
1
July, 2020
1
May, 2019
Available data
536
bed bed3+
356
tsv
188
bigWig
92
bed bed9
80
txt
11
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1020
Homo sapiens
Biosample type
746
primary cell
204
tissue
45
cell line
25
in vitro differentiated cells
Organ
827
epithelium
577
kidney
390
brain
382
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
756
AMP
165
KPMP
80
ENCODE
10
T1D
7
LungMap
2
community
Genome assembly (visualization)
640
hg19
263
GRCh38
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
1020 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
2
2
1
1
2
hepatocyte
13
8
1
1
2
1
4
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
2
2
1
1
endothelial cell of hepatic sinusoid
4
6
6
+ See 155 more…
tissue
small intestine
1
29
15
1
pigmented layer of retina
20
coronary artery
1
3
3
3
2
2
3
1
tibial artery
1
3
3
3
2
2
3
ascending aorta
1
1
4
3
1
1
3
+ See 31 more…
cell line
EndoC_BH1
8
8
3
1
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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