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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
224
gene expression
163
accessible chromatin
112
candidate regulatory elements
target gene predictions
65
differential activity
55
chromatin state
39
binding sites
34
variant allelic effects
24
histone modifications
5
eQTL
3
Fine-mapped variants
2
caQTL
Date released
187
February, 2021
155
September, 2023
101
September, 2022
68
November, 2021
55
February, 2024
24
June, 2020
23
August, 2021
15
May, 2020
15
November, 2022
13
January, 2020
12
February, 2020
11
February, 2023
10
May, 2024
7
April, 2020
7
March, 2020
5
October, 2022
4
March, 2023
3
August, 2017
3
May, 2021
2
March, 2024
2
May, 2022
1
January, 2021
1
January, 2022
1
July, 2020
1
November, 2019
Available data
375
bed bed3+
280
tsv
131
bigWig
78
txt
52
bed bed9
3
bigBed bed9
3
csv
1
bigBed narrowPeak
Organism
726
Homo sapiens
Biosample type
617
primary cell
71
tissue
22
in vitro differentiated cells
16
cell line
Organ
837
epithelium
577
kidney
brain
390
connective tissue
295
musculature of body
238
vasculature
233
lung
pancreas
216
intestine
208
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
137
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
21
lymphatic vessel
19
vein
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
495
AMP
155
KPMP
68
ENCODE
7
LungMap
1
T1D
Genome assembly (visualization)
432
hg19
179
GRCh38
annotation_type!
target gene predictions
organ_slims!
brain
pancreas
BIOSAMPLE
TYPE
726 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
3
2
2
1
1
2
hepatocyte
13
8
2
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
2
2
1
1
endothelial cell of hepatic sinusoid
4
6
6
+ See 132 more…
tissue
tibial nerve
2
3
6
4
2
2
3
pigmented layer of retina
20
esophagus squamous epithelium
1
6
2
breast epithelium
1
5
2
kidney epithelium
1
1
+ See 10 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 3 more…
cell line
keratinocyte
3
1
epithelial cell of prostate
1
1
1
colon epithelial cell
1
1
dermis lymphatic vessel endothelial cell
1
1
glomerular visceral epithelial cell
1
1
+ See 2 more…
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